Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01881 ATGGCGGTTAATATAACAGCCATTAAAACCTCCTCTAATGGAGTTTGGCAAGGAGATAACCCCCTTGACTTTGCCTTTCCTCTGTTAATCGTGCAAACCACCTTAATCCTCCTCCTCTCCCGCTTCCTCGCTTTCGTTCTGAAACCACTTCGCCAACCTAAAGTGATCGCGGAGATAGTCGGCGGAATTCTGCTTGGACCATCGGCGTTTGGACGAAACACAGAGTATTTGCACAGAATATTTCCTTCATGGAGCGGTCCGATTCTGGAATCGGTTGCGAGTATCGGCCTCCTTTTCTTTCTCTTTCTCGTTGGCCTCGAGCTCGATTTAAACTCGATTCGCCGGAGCGGCAAAAGAGCTTTTGGCATAGCAGTCGCTGGAATTTCTCTCCCTTTTGTCTGCGGAATAGGCGTTGCCTTTGTTCTCCGCAGTACCGTCGAAGGAGCCGATAAAGTCGGCTACGGTCAGTTTCTCGTGTTCATGGGGGTGGCGCTGTCGATCACCGCCTTCCCTGTGCTAGCTCGTATATTAGCCGAGCTCAAACTCCTTACAACTCAGGTGGGTGAAACCGCCATGGCCGCCGCTGCTTTCAACGACGTAGCCGCCTGGATATTACTCGCCCTAGCCGTCGCTCTAGCCGGAAATAATGAGAGCGGGGAGCACAGGAGCCCCATAGTTTCCATCTGGGTCCTCCTTTCCGGCGTTGGTTTCGTCGCTTTCATGATGATCGTAATCCGCCCGGCGATGAAATGGGTATCCCGCAGGTGCTCCTCCGAGCACGATGCCGTCGACGAAGCCTACATCTGCCTAACCTTAGCCGGGGTTTTAGTCTCTGGTTTCATCACTGACTTGATTGGAATCCACTCTATTTTCGGAGCATTTGTATTCGGATTAACGATTCCGAAGGGTGGAGATTTTGCGGAGAGATTGATCGACAGGATCGAGGATTTCGTTTCCGGCTTGTTGCTTCCTCTTTATTTTGCATCGAGTGGGTTGAAAACGAACGTTGCTAAAATCAAAGGTGCGAAGTCATGGGGGCTGTTGGTTCTGGTTATATCGACGGCCTGCTCCGGAAAGATCATCGGAACGTTCATCGTGGCAATGATGTTCATGATTCCGGTGAGGGAATCTCTGACTCTTGGTGTACTCATGAATACTAAAGGATTGGTGGAGCTCATCGTCCTCAACATTGGGAGGGAAAAAAAGGTATTAAACGATGAAATCTTCGCCATACTAGTTCTCATGGCACTCTTCACAACCTTCATCACAACTCCGACGGTGATGGCCATTTACAAGCCAGCACGTCGGGTCTCCACCCGCACTTTCAGGAAACTAGGCGATCTATCATCAGCCGACGACGCCTCCGACGAGCTCAGAATCCTGGCTTGTGTTCACGGCCCAAGAAATGTAGCTTCACTCATCGCCCTCATTGAGTCGACTCGGAGCACCAAAAAATCCCTCCTCAAGCTCTTCGTCTTGCACCTGGTCGAACTCACGGAGCGATCGTCTTCCATTATACTGGTTCAACGAGTCCGCCGAAACGGCTTCCCCTTCTTCAACAGGTTTCGTCGAGGTGCGTGGCACGACCAAGTCGCGGCGGCGTTCCAAACCTACAGCCAACTCGGCCGAGTCATCGCACGACCCACCACTGCGATCTCACCGTTGTCCACAATGCACGAGGATATTTGCCACGTGGCAGAAGATAAACGGGTTACGATGATCATCCTGCCTTTCCACAAACAATGGAGGGAAGAAGGTGAGGAAGCGATGGAGAATTTGGGGCATGGCTGGAGAGGAGTCAATCAGAGGGTGATGAAGAATTCACCATGCTCAGTCGCCGTCCTCGTCGACCGTGGATTTGGGTACACCGGCGATCAAACTCCTGGGCCCATTCCCAGTGGGTCCCAAAAGATCTGTGTCTTGTTTTTCGGTGGGCCTGACGATCGTGAAGCCCTAGAGCTGGGTGGTCGGATGGCAGAGCATCCATCCGTTAACGTCACCGTTATTAGATTCATTAGAAAGGAAGAAAGCAACGCCGTTACTTTACGACCCGCACCGTCAAAGTCCAGAGAAAAGAGTTACGCCTTCTCCACAGCCAAAATGAACCGGGAGAAGGAAAAGGAGCTGGACGACGCGGCGGCGGCGGAGTTTCAAAGCAAATGGGAAGGGGCTGTAGAGTACACGGAGAAGGTGGCTAACAACATTGTGGAGGCGGTGTTGGCGATCGGAAGGGATGGTAGGTTTGATCTAATAGTGGTGGGGAAAGGGCGGTTCCCGTCGACAATGGTGGCTGAACTGGCAGAGTGCCAAGCCGAGCACGCAGAGTTGGGGCCAATCGGCGATTTATTAGCCTCCTCCCACCACGGCGTAAAGTCTTCGGTGGTGGTGATTCAGCAACACGACGTGGCTCATGCAGAGGAGATCCCTGTTTCAAAGATCGTGCAAAGTCAGAGCGACAAGTTGAAAAACGACGAGTCTTCTTCTAGTGCGAGGGAGATTTCTCAAGTATAA 2511 52.01 MAVNITAIKTSSNGVWQGDNPLDFAFPLLIVQTTLILLLSRFLAFVLKPLRQPKVIAEIVGGILLGPSAFGRNTEYLHRIFPSWSGPILESVASIGLLFFLFLVGLELDLNSIRRSGKRAFGIAVAGISLPFVCGIGVAFVLRSTVEGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGNNESGEHRSPIVSIWVLLSGVGFVAFMMIVIRPAMKWVSRRCSSEHDAVDEAYICLTLAGVLVSGFITDLIGIHSIFGAFVFGLTIPKGGDFAERLIDRIEDFVSGLLLPLYFASSGLKTNVAKIKGAKSWGLLVLVISTACSGKIIGTFIVAMMFMIPVRESLTLGVLMNTKGLVELIVLNIGREKKVLNDEIFAILVLMALFTTFITTPTVMAIYKPARRVSTRTFRKLGDLSSADDASDELRILACVHGPRNVASLIALIESTRSTKKSLLKLFVLHLVELTERSSSIILVQRVRRNGFPFFNRFRRGAWHDQVAAAFQTYSQLGRVIARPTTAISPLSTMHEDICHVAEDKRVTMIILPFHKQWREEGEEAMENLGHGWRGVNQRVMKNSPCSVAVLVDRGFGYTGDQTPGPIPSGSQKICVLFFGGPDDREALELGGRMAEHPSVNVTVIRFIRKEESNAVTLRPAPSKSREKSYAFSTAKMNREKEKELDDAAAAEFQSKWEGAVEYTEKVANNIVEAVLAIGRDGRFDLIVVGKGRFPSTMVAELAECQAEHAELGPIGDLLASSHHGVKSSVVVIQQHDVAHAEEIPVSKIVQSQSDKLKNDESSSSAREISQV 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 69254349 69257218 + Bma002614.1 Bma01g01881 76398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01881 836 PANTHER CATION/H + ANTIPORTER 3 816 - -
Bma01g01881 836 PANTHER BNAC06G14930D PROTEIN 3 816 - -
Bma01g01881 836 MobiDBLite consensus disorder prediction 814 836 - -
Bma01g01881 836 Gene3D - 458 774 - -
Bma01g01881 836 Pfam Sodium/hydrogen exchanger family 35 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma01g01881 836 Gene3D - 28 439 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01881 Bma-Chr1:69254349 Bma12g00055 Bma-Chr12:1109001 0 dispersed
Bma01g01881 Bma-Chr1:69254349 Bma04g00738 Bma-Chr4:7730755 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01881 - - zju:107431117 1271.14