Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01889 ATGACATTTCCGGCTTGGTTCAGCTCTGGGAAGCCGTTTTTCGCTGTGATTTTCTTGCAGTTTGGATTGGCTGGGATGGATATTCTTTCAAAAGCTGCATTGAATGATGGAATGAGTAACTATGTGTTGGTTGTTTATCGCCATCTTGTTGCCACTGCTGTTGTTGCTCCTTTTGCAGTGATCTTTGACAGGAAAGTTAGGCCAAAAATGACACGATCAGTGTTCATCAAGATACTGTTTCTCGGTTTGCTGGACAGTTGTTTTAACTGTCTTCTGTTTCTGTTTTCCAGGCCTGTAATCGATCAAAATTTATATTTCATGGGGATGAAGTATACGACAGCAACATATGCAGCTGCTATGTGCAATATTCTTCCAGCCATTACCTTCATAATGGCATGGGTTCTTAGGCTAGAGAAAGTGAAAATCAAATGCCTTCGAAGCCAAGCTAAGATTATGGGAACTCTGGCAACAGTGGCCGGAGCCATGATGATGACACTGTTAAAAGGTCCACTGGTTGAGCTGTTTTGGACAAGAGAGACGGCTCATCATGATCAACAAAAGGCCGAGACGAGCATTCATAACTCGATAAAGGGTACGATAATGATCTCCATTGGCTGCTTCAGCTGGGCCTGTTTCATGAACCTGCAAGCAATCACTCTTAAAACATACCCGGCCGAGCTTTCTCTAACAGCCTGGATTTGCCTAGTGGGATCACTGGAAGGAACGGCTGTGGCGCTTGTCATGGAGCGCGGGAACAATGCTGTTTGGTCTATAAAATGGGGATCAAAATTACTTGCTCCGGTTTACAGTGGTATATTCTGCTCTGGCTTAGCTTACTACATTCAAGGAATAGTGATGAAAGAGCGAGGACCAGTTTTTGTGACAGCTTTCAACCCTCTGTCCATGGTTATAGTTGCTGTGATGAGCACATTTATACTGGCTGAACGCCTGTATCTTGGAAGAATACTTGGCGCCCTTGTAATCATTGGAGGTCTCTATCTTGTAATCTGGGGAAAAGGTAAAGATGATGCTGAAGCCTGTGTGTCGAAATCTTTACCAACAAAACAGATTGCCGATTCACTTGAAAATGGGAAAGCTAACTTCAATCATGAGATCACACGGACTCTGGAATTTGATGGTGGAAAAATAGGTGATACAAAGAATTCTATCGCGGTTTAG 1179 43.43 MTFPAWFSSGKPFFAVIFLQFGLAGMDILSKAALNDGMSNYVLVVYRHLVATAVVAPFAVIFDRKVRPKMTRSVFIKILFLGLLDSCFNCLLFLFSRPVIDQNLYFMGMKYTTATYAAAMCNILPAITFIMAWVLRLEKVKIKCLRSQAKIMGTLATVAGAMMMTLLKGPLVELFWTRETAHHDQQKAETSIHNSIKGTIMISIGCFSWACFMNLQAITLKTYPAELSLTAWICLVGSLEGTAVALVMERGNNAVWSIKWGSKLLAPVYSGIFCSGLAYYIQGIVMKERGPVFVTAFNPLSMVIVAVMSTFILAERLYLGRILGALVIIGGLYLVIWGKGKDDAEACVSKSLPTKQIADSLENGKANFNHEITRTLEFDGGKIGDTKNSIAV 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 69604153 69605792 - Bma002624.1 Bma01g01889 76406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01889 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 341 - -
Bma01g01889 392 Pfam EamA-like transporter family 16 164 IPR000620 GO:0016020|GO:0016021
Bma01g01889 392 Pfam EamA-like transporter family 197 336 IPR000620 GO:0016020|GO:0016021
Bma01g01889 392 PANTHER WAT1-RELATED PROTEIN 8 349 - -
Bma01g01889 392 PANTHER WAT1-RELATED PROTEIN 8 349 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01889 Bma-Chr1:69604153 Bma03g00300 Bma-Chr3:2240766 2.56E-119 dispersed
Bma14g00048 Bma-Chr14:605173 Bma01g01889 Bma-Chr1:69604153 1.21E-39 dispersed
Bma01g01889 Bma-Chr1:69604153 Bma08g00989 Bma-Chr8:48983945 1.20E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01889 - - csv:101217902 523.472