Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01921 | ATGATCTTTATCCTCGTTTACTGCACTGCTGGAATCTCCGGCGGCCATATTAATCCTGCTGTCACTTTCGGCCTGTTTCTAGCTCGCAAGGTCTCGTTAATCCGAGCTCTTCTGTACATGGTAGCTCAGTGCTTGGGAGCAATTTGTGGGTGTGGGCTCGTGAAGGCGTTTCAGAATGCTTACTATGAAGAATACCACGGCGGAGCTAACATGCTCGCCGCTGGTTACAACAAAGGCACTGGATTAGCAGCTGAAATCATCGGAACTTTCGTTCTTGTCTATACAGTCTTCTCTGCAACAGACCCGAAGAGAAACGCCAGAGATTCTCACGTTCCGGTCTTGGCGCCACTCCCGATTGGATTTGCGGTGTTTATGGTTCACCTAGCTACCATTCCCATCACCGGCACTGGAATCAACCCAGCTCGAAGCTTTGGGGCTGCAGTGATTTATAATAAAGAAAAAGCCTGGGATGATCAATGGATATTCTGGGTCGGACCATTTATTGGAGCTGCCATTGCAGCAATCTATCACCAGTATATTCTGAGAGCAGGGGCAGTGAAAGCTTTGGGCTCTTTCAGAAGCTCATACTGA | 591 | 48.56 | MIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALLYMVAQCLGAICGCGLVKAFQNAYYEEYHGGANMLAAGYNKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAIYHQYILRAGAVKALGSFRSSY | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 70932899 | 70933635 | - | Bma002671.1 | Bma01g01921 | 76438 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01921 | 196 | PANTHER | AQUAPORIN PIP2-4-RELATED | 1 | 195 | - | - | |
Bma01g01921 | 196 | CDD | MIP | 1 | 180 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | ProSitePatterns | MIP family signature. | 16 | 24 | IPR022357 | - | |
Bma01g01921 | 196 | Gene3D | Glycerol uptake facilitator protein. | 1 | 196 | IPR023271 | - | |
Bma01g01921 | 196 | SUPERFAMILY | Aquaporin-like | 2 | 182 | IPR023271 | - | |
Bma01g01921 | 196 | TIGRFAM | MIP: MIP family channel proteins | 2 | 176 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 195 | IPR034294 | - | |
Bma01g01921 | 196 | PRINTS | Major intrinsic protein family signature | 120 | 142 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | PRINTS | Major intrinsic protein family signature | 84 | 102 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | PRINTS | Major intrinsic protein family signature | 35 | 54 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | PRINTS | Major intrinsic protein family signature | 160 | 180 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01921 | 196 | Pfam | Major intrinsic protein | 1 | 177 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01921 | Bma-Chr1:70932899 | Bma08g01152 | Bma-Chr8:50551770 | 9.38E-116 | dispersed | |
Bma06g00489 | Bma-Chr6:22956743 | Bma01g01921 | Bma-Chr1:70932899 | 1.66E-26 | dispersed | |
Bma01g01921 | Bma-Chr1:70932899 | Bma07g00147 | Bma-Chr7:2120793 | 2.44E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01921 | K09872 | - | csv:101215300 | 374.785 |