Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01926 GCCGAACATAAGAATGGATCTTCAGAGAACGGTTCACTGGGGAGCCTGTGCAAGAGCCGGGACCCGTTGAACTGGGGGGCTGCGGCAGAGGCGCTTAGTGGGAGTCACTTGGACGAGGTGAAGAGGATGGTTGCTGAGTATCGCCGGCCAGTGATAAATCTCGGGGGGGAGACTTTGACCATCGGGCAGGTGGCTGCCATTGCCCGGCGGAGCTCGGACGTATCAGTGGAGCTATCGGAATCCGCTAGAGCTGGTGTGAAGGCGAGCAGTGACTGGGTGATGGATAGTATGAACAAAGGGACAGACAGTTACGGAGTTACTACTGGGTTTGGTGCAACTTCACACCGAAGAACTAAAGAAGGTGGAGCTCTGCAGAAGGAACTGATTAGATTCTTGAACGCTGGAATATTCGGGAACGGTACGGAATCTTGCCACACTTTGCCGCACTCCGCCAGCAGAGCCGCCATGCTAGTGAGAATCAATACCCTCCTCCAAGGATACTCTGGCATTAGATTCGAGATTCTGGAAGCTATAACGAAGCTTCTCAACAGCAACGTCACCCCATGTTTGCCACTTCGCGGTACCATTACGTCCTCCGGCGACCTCGTTCCTCTCTCCTACATTGCCGGACTACTCACTGGAAGACCCAACTCCAAATCTGTCGGCCCCGACGGGAAATCGCTCACTGCTACGGAGGCGTTTGAAATCGCCGGGATTAAATCCAGATTTTTCGAGCTGCAGCCGAAGGAAGGGCTGGCCCTTGTCAATGGCACCGCCGTTGGATCTGGGTTGGCTTCGGTGGTGCTTTTTGAGGCAAATATTCTCGCTGTGTTGTCGGAGATTCTCTCCGCGGTCTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGACCATTTGACCCATAAATTGAAACACCATCCTGGTCAAATCGAAGCTGCCGCAATAATGGAGCACATTTTGGACGGAAGTTCTTACATGAAAGCTGCCAAAAAACTCCACGAAACTGATCCTCTGCAGAAACCAAAACAAGATCGCTACGCTCTTAGAACTTCGCCCCAATGGCTCGGCCCGCTAATTGAAGTGATCCGATACTCAACCAAATCGATCGAAAGAGAAATTAACTCTGTTAATGACAACCCTCTGATCGATGTTTCTAGAAACAAAGCCTTGCACGGCGGAAACTTTCAAGGAACCCCAATCGGAGTGTCCATGGATAATACCCGTTTAGCCATTGCTTCTATTGGGAAGCTCATTTTCGCCCAATTTTCTGAATTAGTGAACGATTTCTACAACAATGGGTTGCCCTCCAATCTCTCTGGGGGTAGAAACCCTAGTTTGGATTATGGATTCAAAGGAGCCGAAATCGCCATGGCTTCATACTGCTCTGAGCTTCAGTACCTCGCAAATCCCGTAACCAGCCATGTCCAAAGTGCAGAGCAACACAATCAAGACGTTAACTCTCTTGGCCTGATATCATCTAGAAAAACAGCTGAATCCGTCGATATTTTGAAATTGATGTCGTCCACTTTCCTGATTGCTCTTTGTCAAGCGATCGATTTGAGGCATTTGGAGGAGAACTTGAGGAACACAGTGAAGAACACAGTCAGTCAAGTTGCTAAGAGGGTTCTAACCACCGGCGCTAATGGACAACTCCACCCATCAAGATTCTGCGAGAAGGACTTACTCAAAGTCGTCGACAGAGAATATGTTTTCGCTTACATCGACGATCCCTGCAGTGCAAATTACCCATTAATGCAAAAGCTCAGACAAGTTCTCGTGGAGCACGCTCTCAACAACGGAGAAGGCGAGAAGAACGTAAGCGCTTCGATCTTCCAAAAAATCACTGCATTTGAGGAGGAGCTGATGGCGATCCTGCCGAAAGAAGTTGAAGCAGCGAGGGTGGTAGTCGAAAGCGGAAATGCCGCCATTGGAAACCAGATAAAGAGCTGCAGATCGTACCCATTGTATAAGTTCGTGAGGGAAGAGCTGGGAACAGGGCTGCTGACGGGGGAGAAGGTGAAGTCTCCGGGTGAAGAATGCGACGTGGTATTCACAGCAATGTGCGAGGGCAAACTCATCGACCCTATTCTGGCCTGCTTAAGCGACTGGAATGGCGCTCCAATCCCCATTTGC 2136 50.23 AEHKNGSSENGSLGSLCKSRDPLNWGAAAEALSGSHLDEVKRMVAEYRRPVINLGGETLTIGQVAAIARRSSDVSVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNVTPCLPLRGTITSSGDLVPLSYIAGLLTGRPNSKSVGPDGKSLTATEAFEIAGIKSRFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRYSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAESVDILKLMSSTFLIALCQAIDLRHLEENLRNTVKNTVSQVAKRVLTTGANGQLHPSRFCEKDLLKVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALNNGEGEKNVSASIFQKITAFEEELMAILPKEVEAARVVVESGNAAIGNQIKSCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 71104066 71106661 + Bma030270 Bma01g01926 76443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01926 712 Gene3D - 14 258 IPR024083 -
Bma01g01926 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Bma01g01926 712 Gene3D - 525 646 IPR023144 -
Bma01g01926 712 CDD PAL-HAL 57 522 IPR001106 -
Bma01g01926 712 Pfam Aromatic amino acid lyase 59 533 IPR001106 -
Bma01g01926 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
Bma01g01926 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bma01g01926 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Bma01g01926 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Bma01g01926 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01926 Bma04g00602 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01926 Bma-Chr1:71104066 Bma04g00605 Bma-Chr4:5782649 0 dispersed
Bma01g01926 Bma-Chr1:71104066 Bma03g00343 Bma-Chr3:2569170 0 wgd
Bma01g01926 Bma-Chr1:71104066 Bma04g00602 Bma-Chr4:5744694 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01926 K10775 - zju:107433056 1240.33