Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01933 ATGGTTTACGATGAGTTGAAGAAGTCCATTGAGGAGATGAAGCCATTGGCACTAGATGAAGATTTACCGGGAATGGGCCAGTACTACTGCTTGCATTGCGACCGATACTTTGCGAATATGACAGTGAGAGATGAGCATTTCAACACCAAACGTCACAAGAAGCGAGTAAAAAAAATGATGGGACGGGCTCCACACACTCAACTTGATGCGGACATGGCTGGGGGGATGGGTGCTCCAGACAATGGGCCAAAGCTCATGTCAATGTGA 267 47.57 MVYDELKKSIEEMKPLALDEDLPGMGQYYCLHCDRYFANMTVRDEHFNTKRHKKRVKKMMGRAPHTQLDADMAGGMGAPDNGPKLMSM 88
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 71428177 71429185 + Bma002689.1 Bma01g01933 76450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01933 88 ProSiteProfiles Zinc finger matrin-type profile. 28 58 IPR000690 GO:0003676|GO:0005634|GO:0008270
Bma01g01933 88 PANTHER EXPRESSED PROTEIN 1 88 - -
Bma01g01933 88 ProSitePatterns Zinc finger C2H2 type domain signature. 30 52 IPR013087 -
Bma01g01933 88 SUPERFAMILY beta-beta-alpha zinc fingers 15 78 IPR036236 -
Bma01g01933 88 SMART ZnF_U1_5 25 59 IPR003604 GO:0003676|GO:0008270
Bma01g01933 88 MobiDBLite consensus disorder prediction 48 88 - -
Bma01g01933 88 Pfam Zinc-finger double-stranded RNA-binding 27 53 IPR022755 -
Bma01g01933 88 Gene3D Classic Zinc Finger 15 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01933 K14821 - qsu:112025713 162.155