Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01942 | ATGCCTTTCCGCAGTTTCGCTTTAGGTACGCAGCAGGAGTTCGTCCGACCGGAGCTATGGAAGTGCGGCGTGGCGGAGTTTATCTCCACGTTGATCTTCGTCTTCGCCGGCCAGGGATCGGGAATGGCGTTTGCCAAGATAACGAGTAATGGCGCAACCACTGAAGCCTCAATAATCGCCGCCTCTCTCGCCCACGGTTTCGGTCTCTTCATTGGTGTCGCCGTCAGCTTTAACATCTCCGGGGGGCATGTTAATCCTGCAGTCACCTTTGGTGCATTCGTTGGCGGAAACGTTTCTCTCCTCCGCCTCATTGTTTACTGGATCGGTCAGCTTCTCGGCTCTGTCGCTGCATGTGGTCTTCTTAAATTCACCACCCACGGCATGGTTACGACACCCTTTTTGTTCTCCTCTGATATTACAGTCTGGAACGCATTCGTTTTCGAGATCGTCATGACTTTCGGTCTGGTCTATACGGTCTATGCCACAGCAATTGATCCAAACAAAGGAACTTTAAAGACAATTGCGCCTATCGCTATCGGCTTAGTCGTTGGCGCTAATGTTCTGGCCGGTGGAGTCTTCGAGGGGGCGTCGATGAACCCGGCCGTCTCATTTGGACCCGCTTTGGTAAGCTGGAGCTGGGACCACCAATGGGTCTACTGGGCCGGACCCCTCATCGGCGGCGGCATCGCCGGCCTTGTTTTCGAGGGTTTTTTCATCAAGCAGACCCACGATCCTCTCCCTCAGGAATTCTGA | 753 | 53.92 | MPFRSFALGTQQEFVRPELWKCGVAEFISTLIFVFAGQGSGMAFAKITSNGATTEASIIAASLAHGFGLFIGVAVSFNISGGHVNPAVTFGAFVGGNVSLLRLIVYWIGQLLGSVAACGLLKFTTHGMVTTPFLFSSDITVWNAFVFEIVMTFGLVYTVYATAIDPNKGTLKTIAPIAIGLVVGANVLAGGVFEGASMNPAVSFGPALVSWSWDHQWVYWAGPLIGGGIAGLVFEGFFIKQTHDPLPQEF | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 71826589 | 71827498 | + | Bma002701.1 | Bma01g01942 | 76459 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01942 | 250 | PANTHER | AQUAPORIN-8 | 1 | 248 | IPR034294 | - | |
Bma01g01942 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 217 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | PRINTS | Major intrinsic protein family signature | 180 | 202 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | CDD | MIP | 24 | 235 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | Pfam | Major intrinsic protein | 15 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma01g01942 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 248 | IPR023271 | - | |
Bma01g01942 | 250 | PANTHER | AQUAPORIN TIP1-1 | 1 | 248 | - | - | |
Bma01g01942 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 246 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g01942 | Bma10g00237 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01942 | Bma-Chr1:71826589 | Bma10g00051 | Bma-Chr10:539004 | 1.03E-119 | dispersed | |
Bma07g01058 | Bma-Chr7:42617601 | Bma01g01942 | Bma-Chr1:71826589 | 7.71E-21 | transposed | |
Bma01g01942 | Bma-Chr1:71826589 | Bma04g00584 | Bma-Chr4:5587666 | 1.97E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01942 | K09873 | - | pvy:116107287 | 355.525 |