Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01956 ATGATGCTGAGGAAAGGTAGAACGTCTTCCAAAACAATGAAGAAGCTTCATTCATATCTCTTCATTGTCACTCTCTTGCCTACTCTGATTCGCGGTTCAGAAAGCACTGAACGAAAGCCATGGATCGTTTACATGGGAGATTTACGCGGAGATGATGCTTCTCTGTCAGATCTCCACCATAACATGCTTTTGGAAGCCATTGGAGATGAGAAATTGGCCAGAGAGTCCAGAATACATACCTACGAGAAGAGCTTGAACGCTTTTGCTGCGCGATTGTTGCCTCATGAGGCAGACAAACTAAATGATCAAGATGGTGTGGTATCAGTGTTTCCGAGCAAAAAGAGGAAGCTTAGAACAACTCGTTCATGGGATTTTGTTGGACTGACAAAAAACGCAAAGAGACAAGCCGTCGTCGAGAGTAACATCGTCGTAGGTGTGCTCGATACAGGAATTTGGATGGGTGCTCCCAGCTTTAATGACGCAGGATTCGGTCCACCGCCACCCAAATGGAAAGCCAAATGCCACAAAGGCGATAATTTCACAGGCTGCAACAACAAAGTGATCGGAGCAAAGTACTTTGATCTGGACAAAATTGATCCTAACCCAAGTCCAGCTGATTCTGATGGCCACGGATCCCACACTGCCTCCACCGCCGCCGGCGCCATAGTCAAAGGAGCGAGCTTGTACGGGATAGCCAAAGGGACGGCGCGTGGGGGTGTGCCAGCGGCTCGTATAGCCGCCTACAAAGTCTGCTGGACCTTTAGCTGCACTGATATCGATCTACTGGCTGGATTCGATGAGGCCATTTCGGATGGGGTGGATGTGATATCCATTTCAATTGGAGGTCCTTCAATGGATTTTTTTGACGATTCGATTGCAATCGGAGCGTTTCATGCGATGAAGAAGGGTATTTTGACATCTTGTTCGGCTGGAAATGATGGGCCTATTGCTTCGACGGTGGAAAATGTTGCGCCCTGGATTATGACAGTGGCTGCAACAAGCCTTGATAGAATGCTTGCTGCTACTGTCACGCTGGGCAATGGGGTGGAAACTCCGGGTATGGCCATAAACACATTTTCACCAAAGAAAAAAATGTACCCTCTAACAAGTGGGACTAAGGCATCAAACGTCACCGGAGACGAGTATGGCAGTCCCAGTGCTTGCGACTACGGAACCCTAAACATAAACAAAGTGAAAGGGAAGATCGTCTACTGCCAAGGACTCGCCGTCCCTGAATACAACATACGAGATTTACGTGGGGCCGGAGTTATCATGAAACTTGATGCAAAACAAGACTATACATTCCCCATTGTAATTCCCGGTACGTACGTCGCCCCCAACGACGGCGATCAAATCGATCTTTACATCAATTCTACCAAGAATCCTCAGGCAGTTATTCATAAAACAAAGCGTGTAAAAATTACTGCGCCTTTTGTTGCTTCTTTCTCCTCCAGAGGACCTCAAATAATTACCACGAATATTCTCAAGCCTGATATTGCTGCGCCAGGGATAGACATATTAGCTGCATATTCACACCTAACAACGGTAACAGACGATCCAGACGACACACGACATGTCGTGTTCAATATAATATCAGGTACTTCGATGGCTTGTCCTCACGCAGCTGCAGCGGCTGCCTACGTGAAGTCGTTCCACCCAGCATGGTCGCCGGCGGCGATAAAATCAGCCCTCATGACAACCGCCACTCCCATGAAAATCAAAGAGAAAGACGCAGAACTGGGATCAGGATCTGGACAAATAAACCCCATTAGAGCTTTGCACCCAGGTCTGGTTTATGACCTTTCAATTTCTTCTTACATCAGTTTTCTCTGCAAAGAAGGGTACAACAGCACAACCATCGGCCTACTCATCGGCGGAAAGAAGAAAATCAAATGTTCCGACTTCAAGCCAGCGGCGGGAACCGACGGTCTCAACTACCCAAATATGCACACGCAGCTCTCTAAATCCACATCAAAAATCTCGGCTGTTTTCTACCGGATGGTAACCAATGTGGGATATGGAAAGTCAGTGTACAAAGCCACTGTGAAATCGCCGAAGGGTTTGTCGATCGCAGTGACTCCGAATACTTTGGAGTTTGACAAACCATATCTGAAGAAGTCATTTAAGGTGGTGGTGAAGGGTTTGATGCCGTGTAAAACTGAAGTTTTATCGGCTTTGCTCGAGTGGAATGACTCCAAGCACAGCGTTAATAGCCATATTCTTATTTATAGAGCATTGTCATAG 2244 46.97 MMLRKGRTSSKTMKKLHSYLFIVTLLPTLIRGSESTERKPWIVYMGDLRGDDASLSDLHHNMLLEAIGDEKLARESRIHTYEKSLNAFAARLLPHEADKLNDQDGVVSVFPSKKRKLRTTRSWDFVGLTKNAKRQAVVESNIVVGVLDTGIWMGAPSFNDAGFGPPPPKWKAKCHKGDNFTGCNNKVIGAKYFDLDKIDPNPSPADSDGHGSHTASTAAGAIVKGASLYGIAKGTARGGVPAARIAAYKVCWTFSCTDIDLLAGFDEAISDGVDVISISIGGPSMDFFDDSIAIGAFHAMKKGILTSCSAGNDGPIASTVENVAPWIMTVAATSLDRMLAATVTLGNGVETPGMAINTFSPKKKMYPLTSGTKASNVTGDEYGSPSACDYGTLNINKVKGKIVYCQGLAVPEYNIRDLRGAGVIMKLDAKQDYTFPIVIPGTYVAPNDGDQIDLYINSTKNPQAVIHKTKRVKITAPFVASFSSRGPQIITTNILKPDIAAPGIDILAAYSHLTTVTDDPDDTRHVVFNIISGTSMACPHAAAAAAYVKSFHPAWSPAAIKSALMTTATPMKIKEKDAELGSGSGQINPIRALHPGLVYDLSISSYISFLCKEGYNSTTIGLLIGGKKKIKCSDFKPAAGTDGLNYPNMHTQLSKSTSKISAVFYRMVTNVGYGKSVYKATVKSPKGLSIAVTPNTLEFDKPYLKKSFKVVVKGLMPCKTEVLSALLEWNDSKHSVNSHILIYRALS 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72370129 72455059 + Bma002721.1 Bma01g01956 76473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01956 747 PANTHER CUCUMISIN PROTEIN 30 745 - -
Bma01g01956 747 Gene3D - 336 472 - -
Bma01g01956 747 CDD PA_subtilisin_like 342 466 - -
Bma01g01956 747 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Bma01g01956 747 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Bma01g01956 747 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Bma01g01956 747 Gene3D - 610 745 - -
Bma01g01956 747 Pfam Subtilase family 140 580 IPR000209 GO:0006508|GO:0008236
Bma01g01956 747 Gene3D Peptidase S8/S53 domain 141 606 IPR036852 GO:0004252|GO:0006508
Bma01g01956 747 Pfam Peptidase inhibitor I9 42 117 IPR010259 -
Bma01g01956 747 CDD Peptidases_S8_3 116 569 IPR034197 -
Bma01g01956 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 118 IPR037045 -
Bma01g01956 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 745 IPR045051 -
Bma01g01956 747 SUPERFAMILY Subtilisin-like 117 597 IPR036852 GO:0004252|GO:0006508
Bma01g01956 747 ProSiteProfiles Serine proteases, subtilase domain profile. 122 593 - -
Bma01g01956 747 Pfam Fibronectin type-III domain 644 742 IPR041469 -
Bma01g01956 747 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01956 Bma-Chr1:72370129 Bma08g01100 Bma-Chr8:49995509 0 dispersed
Bma01g01956 Bma-Chr1:72370129 Bma01g00673 Bma-Chr1:6132011 3.05E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01956 - - jre:109005335 967.607