Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01969 ATGGAGGAGAAGGACAGCCCATTTTCTGGGTCTCCCGGAGTATCGGAAACCGAGTCGACCCCTGCGCTAATGACTGAGATGGCGCCAAAAGTGGTCTCTATGGATGGGGAGAAAAGCTTTCTACCTTCGACTACGACTAAATCGACGATGGTGACGAGGGGAGGAGGAGGGTCGGTGAGTGGCGATTTTCTCGGGAAAAAGAAGAGGGGAAGGCCGAGAAAATATGATTCGGATGGGAACTTGAGCTTGGCTTACCAGAAAATTGCTTCGCCAGATGGGTTTTCTCTGTCACCCACTTCACCTTCTGAGTTTTCTTCCCAAAAAGGGCGAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCTCATATTGTCACTGTGAAAACAGGGGAGGATGTTGCAGGGAAAATTCTTTCATTTTCACAGAAAGGACCGAGAATGATTTGCGTTCTGTCAGCAAATGGGGCTGTCTCTAATGTTACTATTCACCAACCAGGCTCTTCTGGTGTCATTTTGACATACGAGGGTAGATTTGAGATTCTGTCCTTATCTGGGTCGTTCACAGTAACAGACAGTGGTGGTACGAGGAGTAGGACAGGCGGATTGAGCGTCTCCTTGGCAGGTCCAGACGGTCGAGTCATCGGTGGTGGTATCGCTGGTTTATTAGTGGCTGCCAGCCCCATCCAAATTGTCATCGGAAGTTTCGTGCCGAACGAGTTCAAGATGCATAAAAGGAAGTACCGGAGAGAGTATGCAGTCTCTTCCGCAAACAGAGCTGCACCAGAGACCAGGCCAATCCCACAAGACAACCCTGAGAACGAAATTCGCTCCTCTCCGTTGACAGGGCAAACGAACGGGGAAGTAGATGGGTGCGAAAGTGAAAAGCACAATCTCAATTTTCCGTCCGAGAATACTGCATGGACTATCTCGGCTTCTTCATCGGAACAGAGGATATCTCCTGATATTAACATTTCTGTGTCATTTGGAGAGTAG 999 48.85 MEEKDSPFSGSPGVSETESTPALMTEMAPKVVSMDGEKSFLPSTTTKSTMVTRGGGGSVSGDFLGKKKRGRPRKYDSDGNLSLAYQKIASPDGFSLSPTSPSEFSSQKGRGELFANTAGGDFTPHIVTVKTGEDVAGKILSFSQKGPRMICVLSANGAVSNVTIHQPGSSGVILTYEGRFEILSLSGSFTVTDSGGTRSRTGGLSVSLAGPDGRVIGGGIAGLLVAASPIQIVIGSFVPNEFKMHKRKYRREYAVSSANRAAPETRPIPQDNPENEIRSSPLTGQTNGEVDGCESEKHNLNFPSENTAWTISASSSEQRISPDINISVSFGE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 73398310 73400220 - Bma002749.1 Bma01g01969 76486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01969 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 243 - -
Bma01g01969 332 MobiDBLite consensus disorder prediction 272 290 - -
Bma01g01969 332 MobiDBLite consensus disorder prediction 1 78 - -
Bma01g01969 332 ProSiteProfiles PPC domain profile profile. 119 261 IPR005175 -
Bma01g01969 332 MobiDBLite consensus disorder prediction 255 304 - -
Bma01g01969 332 MobiDBLite consensus disorder prediction 38 55 - -
Bma01g01969 332 CDD DUF296 123 237 IPR005175 -
Bma01g01969 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 238 IPR005175 -
Bma01g01969 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 329 IPR039605 GO:0003680
Bma01g01969 332 Gene3D - 124 258 - -
Bma01g01969 332 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 8 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01969 Bma-Chr1:73398310 Bma06g01189 Bma-Chr6:48961601 2.27E-61 dispersed
Bma01g01960 Bma-Chr1:72759606 Bma01g01969 Bma-Chr1:73398310 0 proximal
Bma12g00188 Bma-Chr12:2557149 Bma01g01969 Bma-Chr1:73398310 9.09E-74 transposed
Bma01g01969 Bma-Chr1:73398310 Bma04g00567 Bma-Chr4:5132139 1.32E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01969 - - tcc:18598144 334.339