Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g01969 | ATGGAGGAGAAGGACAGCCCATTTTCTGGGTCTCCCGGAGTATCGGAAACCGAGTCGACCCCTGCGCTAATGACTGAGATGGCGCCAAAAGTGGTCTCTATGGATGGGGAGAAAAGCTTTCTACCTTCGACTACGACTAAATCGACGATGGTGACGAGGGGAGGAGGAGGGTCGGTGAGTGGCGATTTTCTCGGGAAAAAGAAGAGGGGAAGGCCGAGAAAATATGATTCGGATGGGAACTTGAGCTTGGCTTACCAGAAAATTGCTTCGCCAGATGGGTTTTCTCTGTCACCCACTTCACCTTCTGAGTTTTCTTCCCAAAAAGGGCGAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCTCATATTGTCACTGTGAAAACAGGGGAGGATGTTGCAGGGAAAATTCTTTCATTTTCACAGAAAGGACCGAGAATGATTTGCGTTCTGTCAGCAAATGGGGCTGTCTCTAATGTTACTATTCACCAACCAGGCTCTTCTGGTGTCATTTTGACATACGAGGGTAGATTTGAGATTCTGTCCTTATCTGGGTCGTTCACAGTAACAGACAGTGGTGGTACGAGGAGTAGGACAGGCGGATTGAGCGTCTCCTTGGCAGGTCCAGACGGTCGAGTCATCGGTGGTGGTATCGCTGGTTTATTAGTGGCTGCCAGCCCCATCCAAATTGTCATCGGAAGTTTCGTGCCGAACGAGTTCAAGATGCATAAAAGGAAGTACCGGAGAGAGTATGCAGTCTCTTCCGCAAACAGAGCTGCACCAGAGACCAGGCCAATCCCACAAGACAACCCTGAGAACGAAATTCGCTCCTCTCCGTTGACAGGGCAAACGAACGGGGAAGTAGATGGGTGCGAAAGTGAAAAGCACAATCTCAATTTTCCGTCCGAGAATACTGCATGGACTATCTCGGCTTCTTCATCGGAACAGAGGATATCTCCTGATATTAACATTTCTGTGTCATTTGGAGAGTAG | 999 | 48.85 | MEEKDSPFSGSPGVSETESTPALMTEMAPKVVSMDGEKSFLPSTTTKSTMVTRGGGGSVSGDFLGKKKRGRPRKYDSDGNLSLAYQKIASPDGFSLSPTSPSEFSSQKGRGELFANTAGGDFTPHIVTVKTGEDVAGKILSFSQKGPRMICVLSANGAVSNVTIHQPGSSGVILTYEGRFEILSLSGSFTVTDSGGTRSRTGGLSVSLAGPDGRVIGGGIAGLLVAASPIQIVIGSFVPNEFKMHKRKYRREYAVSSANRAAPETRPIPQDNPENEIRSSPLTGQTNGEVDGCESEKHNLNFPSENTAWTISASSSEQRISPDINISVSFGE | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 73398310 | 73400220 | - | Bma002749.1 | Bma01g01969 | 76486 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g01969 | 332 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 121 | 243 | - | - | |
Bma01g01969 | 332 | MobiDBLite | consensus disorder prediction | 272 | 290 | - | - | |
Bma01g01969 | 332 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Bma01g01969 | 332 | ProSiteProfiles | PPC domain profile profile. | 119 | 261 | IPR005175 | - | |
Bma01g01969 | 332 | MobiDBLite | consensus disorder prediction | 255 | 304 | - | - | |
Bma01g01969 | 332 | MobiDBLite | consensus disorder prediction | 38 | 55 | - | - | |
Bma01g01969 | 332 | CDD | DUF296 | 123 | 237 | IPR005175 | - | |
Bma01g01969 | 332 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 124 | 238 | IPR005175 | - | |
Bma01g01969 | 332 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 329 | IPR039605 | GO:0003680 | |
Bma01g01969 | 332 | Gene3D | - | 124 | 258 | - | - | |
Bma01g01969 | 332 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 8 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01969 | Bma-Chr1:73398310 | Bma06g01189 | Bma-Chr6:48961601 | 2.27E-61 | dispersed | |
Bma01g01960 | Bma-Chr1:72759606 | Bma01g01969 | Bma-Chr1:73398310 | 0 | proximal | |
Bma12g00188 | Bma-Chr12:2557149 | Bma01g01969 | Bma-Chr1:73398310 | 9.09E-74 | transposed | |
Bma01g01969 | Bma-Chr1:73398310 | Bma04g00567 | Bma-Chr4:5132139 | 1.32E-179 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g01969 | - | - | tcc:18598144 | 334.339 |