Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01972 ATGGGGTTTTGTGTGTTCTTTGTTCTTCTTCTGGTTTTCTCATCAGCTGAAGGAGACCCTCTTGTTCCAGCTCTTTTCATCTTCGGGGACTCTGTGGTTGATGTCGGAAATAACAACTATTTGCATACGCTTGTCAAGGCTAACTTTCTTCCTTATGGTAGAGACTTCGTTTCCCACCAACCAACTGGAAGGTTTTGCAATGGGAAGCTGGCCACGGACTTCACTGCTGAATATCTGGGTTTCACATCATACCCACCAGCATACCTTAGCCGTGATGCCGCCGGCGAAGCCCTCTTAACCGGAGTCAACTTTGCCTCTGCTGCCTCTGGCTACTATGAAAGCACTGCCCGGTTATATCAATCACTTCCACTGAGCCGGCAATTGAACAACTACAAGCAATACCAGAACGAAGTGGTGAATATGGTAGGAAGAAGCAAAGCCAACGCTATATTTTCTGATGCAATTTATCTTCTCAGCGCTGGAAGCAGTGATTTTATTCAGAATTACTATGTCAACCCATTTCTTAGAGGAAACTACTCGCCTGATAAGTTTTCTGAACTTCTAATCACATCCTTCTCCGATTTCATTCAGAATGTATATGATCTTGGAGGAAGAAGAATAGGGGTGACTAGTTTACCACCAACGGGGTGTTTACCGGCAGCCATTACACTTTTCGGCCGAGGAAGCAACAGTTGCGTAGAAAGGTTAAACCAAGACGCCATCTCATTCAACAATAAGCTAAACGACACCTCTGAGGGCTTGAAGACCAGATTTCCCAACCTTAAACTTGTAGTCTTCGACATTTACAACCCGCTCTTAGATATGATAAAAAAGCCTTCTGATTTTGGGTTCTTTGAATCAAGAAGAGCATGTTGTGGGACAGGAATCCTAGAAACTTCCATTCTCTGCAACAGACGATCAATAGGGACATGTTCAAATGCTACAGGCTATGTTTTCTGGGATGGAGTTCATCCATCTGAAGCTGCTAATGAAGTCTTGGCTGGTTCTCTTCTTGCTCAAGGATTTGACCTAATCTCTTAA 1041 43.9 MGFCVFFVLLLVFSSAEGDPLVPALFIFGDSVVDVGNNNYLHTLVKANFLPYGRDFVSHQPTGRFCNGKLATDFTAEYLGFTSYPPAYLSRDAAGEALLTGVNFASAASGYYESTARLYQSLPLSRQLNNYKQYQNEVVNMVGRSKANAIFSDAIYLLSAGSSDFIQNYYVNPFLRGNYSPDKFSELLITSFSDFIQNVYDLGGRRIGVTSLPPTGCLPAAITLFGRGSNSCVERLNQDAISFNNKLNDTSEGLKTRFPNLKLVVFDIYNPLLDMIKKPSDFGFFESRRACCGTGILETSILCNRRSIGTCSNATGYVFWDGVHPSEAANEVLAGSLLAQGFDLIS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 73559772 73562170 - Bma002754.1 Bma01g01972 76489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01972 346 Gene3D SGNH hydrolase 14 341 IPR036514 -
Bma01g01972 346 PANTHER GDSL-MOTIF LIPASE 5 345 - -
Bma01g01972 346 SUPERFAMILY SGNH hydrolase 25 338 - -
Bma01g01972 346 Pfam GDSL-like Lipase/Acylhydrolase 25 334 IPR001087 GO:0016788
Bma01g01972 346 PANTHER GDSL ESTERASE/LIPASE EXL3 5 345 - -
Bma01g01972 346 CDD SGNH_plant_lipase_like 23 338 IPR035669 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01972 Bma-Chr1:73559772 Bma07g00177 Bma-Chr7:2318392 7.56E-170 dispersed
Bma13g01243 Bma-Chr13:45757927 Bma01g01972 Bma-Chr1:73559772 8.51E-25 dispersed
Bma01g01972 Bma-Chr1:73559772 Bma14g00972 Bma-Chr14:11358174 1.01E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01972 - - pop:18100093 538.88