Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g01974 TGCTCAAAACACGATCCTCTCCTCACCATGCTTCACATACTGACCTTCTTCTTTCTCTTGTTTCTCAGAAGCTTTTCTCAGAAAACTTGCCCTAATTGTGGCTCCATTGAAGTGCCTTATCCTCTCAGGACTGCTTCTAACTGCGGCGACTCGGATTATTCTCTCCGGTGCGATAATATTTCGAAGAAGCTTTACCTTGATTCTCTTAATGGAAGTTCTTATCTTATTCTCAGAATCACGCCTTCGTCTCAAACCATGGTGGTCAAGCCGTCGCCATGGCTTCCGACGACTTGTGTTACTCAAGACATGACGATAAGCGAGGGTCTTTGGCTAAACCAGTCGCTCCCTTTCAACATAACTTCGTCCAACACTATCTTCCTCTTCAATTGCTCTCCTCGCCTCTTAGTCTCGCCTCTGAACTGCACTCCTTCGAGTATCTGTCACGTTTACCTGCAGAGCTCTGGACGTGTCGACTCCGCTCGGGCTGCTCAGTGCAGTACTGGTCTCGTCCCGTGTTGTACTTTCCGAGCTGGCGGTATGCCTTCGGCTTATAAGATCAGACTCCATAGCTCGGGATGTAGAGCTTTTAGAAGCATTCTTCATTTGGATGTCGAAAAGCCTGCAAATCAATGGGAAGAAGGGTTGGAAATTCAGTGGAAACCTCCCTCTGAACCGCTTTGTACATCACAACTCGATTGCCTCGGAGCTTCCCGATGTTCGGTCTCCGATGCAGACGGCCGACACCGATGCCTCTGCAACGAGAACTATTGTTGGGATCATCTTCTCGGCATCTGCGTGAGAAATAAGAAAAACAAAAAATCAAAACTTGCCTTGAAGGTCTCCATATTTATGATCTCCTTCGTCGCTCTATCTCTGGCTATGTCGATAATTACAGTTAAAAAGTGTCGAAGAATCACGGACCGGGCGAAACTTGCCAAGGTAAGGGAAGAGTTGCTAAGGCTAAGCAATGGTGGGAAGCCCGCGAAGCTGTTCAGCTTCAAAGAGGTAAAGAAGGCGACAAACGGATTTTCGAAAAACCGAGTTTTGGGAAGTGGCGGCTTTGGGGAAGTTTACAAAGGAGAACTTCAAGATGGGACGGTGGTGGCCGTGAAATCAGCCAAAATTGGCAGCATAAAGAGCACAAAACAAGTACTAAACGAGGTTGGAATTCTGTCCCAAGTCAATCACAAAAACCTCGTAAGACTTCTCGGGTGTTGCATAGAATCTGAGCAGCCATTGATGATCTACGAGTTCGTTTCGAACGGAACTCTACACGATCATTTACACGGGAAGTTCTCAACTTTCTTAGATTGGAAAACCAGGCTCCAAATTGCTCTACAAATAGCTGAAGCATTGGCTTATCTACATTCAGCTGCATACCCTCCAATCTATCATAGAGATGTCAAATCCACAAATATATTATTAGATAACAATTTCAATGCCAAAGTTTCCGATTTCGGGCTCTCCCGGCTGGTTAGCCCCGGTTCCAGCCACGTTTCGACTTGTGCTCAAGGAACATTAGGCTACTTGGATCCCGAATACTATAGAACTTATAAGCTAACCGATAAGAGTGATGTTTTTAGTTATGGGGTCGTCTTGCTCGAGCTTCTAACTTCTCAGAAATCGATTGATTTTTCAAGAGATGAAGAAGATATCAATTTAGCCATTTATGTGAGCCAAAGGGTCAGCAAAAATGACAGAATCATAGAAGTTGTGGATCGGAGATTGCTCGGAAATGACCCGTCCGGCGAATTACCGAGAAGTGTGAAGCTGTTGTTGGAGCTTGCACTTGCCTGTTTGAGAGAGAAGAGGGAAGAAAGGCCATGCATGAAGAATGTCGTTCAAGAGCTTGAATGTCTCATACATGTTTCAAATCATCAAGCAAAGCCCACTGAGATCAGTCAAGAAAGTATCCATTTAAAATGA 1926 45.17 CSKHDPLLTMLHILTFFFLLFLRSFSQKTCPNCGSIEVPYPLRTASNCGDSDYSLRCDNISKKLYLDSLNGSSYLILRITPSSQTMVVKPSPWLPTTCVTQDMTISEGLWLNQSLPFNITSSNTIFLFNCSPRLLVSPLNCTPSSICHVYLQSSGRVDSARAAQCSTGLVPCCTFRAGGMPSAYKIRLHSSGCRAFRSILHLDVEKPANQWEEGLEIQWKPPSEPLCTSQLDCLGASRCSVSDADGRHRCLCNENYCWDHLLGICVRNKKNKKSKLALKVSIFMISFVALSLAMSIITVKKCRRITDRAKLAKVREELLRLSNGGKPAKLFSFKEVKKATNGFSKNRVLGSGGFGEVYKGELQDGTVVAVKSAKIGSIKSTKQVLNEVGILSQVNHKNLVRLLGCCIESEQPLMIYEFVSNGTLHDHLHGKFSTFLDWKTRLQIALQIAEALAYLHSAAYPPIYHRDVKSTNILLDNNFNAKVSDFGLSRLVSPGSSHVSTCAQGTLGYLDPEYYRTYKLTDKSDVFSYGVVLLELLTSQKSIDFSRDEEDINLAIYVSQRVSKNDRIIEVVDRRLLGNDPSGELPRSVKLLLELALACLREKREERPCMKNVVQELECLIHVSNHQAKPTEISQESIHLK 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 73570263 73572188 + Bma002756.1 Bma01g01974 76491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g01974 641 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Bma01g01974 641 Gene3D Transferase(Phosphotransferase) domain 1 419 639 - -
Bma01g01974 641 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01974 641 Gene3D Phosphorylase Kinase; domain 1 312 418 - -
Bma01g01974 641 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
Bma01g01974 641 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 629 IPR045274 GO:0007166
Bma01g01974 641 SMART serkin_6 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g01974 641 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 21 629 - -
Bma01g01974 641 CDD STKc_IRAK 349 618 - -
Bma01g01974 641 Pfam Protein tyrosine and serine/threonine kinase 345 617 IPR001245 GO:0004672|GO:0006468
Bma01g01974 641 SUPERFAMILY Protein kinase-like (PK-like) 329 627 IPR011009 -
Bma01g01974 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01974 Bma-Chr1:73570263 Bma09g00327 Bma-Chr9:28302473 2.88E-89 dispersed
Bma08g01105 Bma-Chr8:50033293 Bma01g01974 Bma-Chr1:73570263 2.34E-10 dispersed
Bma01g01974 Bma-Chr1:73570263 Bma02g01002 Bma-Chr2:50829937 4.20E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66295 PF07714 PK_Tyr_Ser-Thr 1.40E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g01974 - - jre:109008465 909.442