Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02005 GGAAGCATGGGGATTCCTCAGGCGATGGAAATCCTGAGCGAAAGAGCAGCTTTTATTAGAGACTCGCTGCAAAAGAGCCAAACTATCACCAATAACATGGTCGACATTCTTGGTTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGTCCCACTCAGATAAGAACGCATTCAATCAGGAAAGCTCATGAGAATATTGATAAGACGGTCAAGGCTGCAGAGGTCATATTGGCGCAGTTCGACTTGTCTCGGAAGGCAGAGGCTAAAATATTAAGAGGGCCGCATGAGGACCTTGAAAGTTACTTGGAAGCCATTGACCAACTGAGAAGCATTATTCGCTTTTTTGGTGGCAATAAAAATTTTAAGAGTAGTGATTCAGTGCTTAACCACACAAACAACTTGCTTGCAAAAGCTATTTCTAAGCTTGAAGATGAATTCAGGCAGCTTCTGACGAACTACAGTAAGCCTGTTGAACCTGATCGTCTATTTGATTGCCTTCCCAACTCTCTACGCCCATCATCAGAAATATCCGGGCATCAAAGCAATGCTACTAGCAAGGGTAGTTCTATGCACCAAAGCAAAAGATTGGAAACTGCTGTGTATACACCTCTGTCATTAATTCCTAATAGAGTTGTGCCGCTATTGCATGACTTAGCCCAGCAAATGGTTCAGGCTGGCCATCAACAACAGCTGCTGAGGATATACAGGGATACTCGTGCTTCGGTTTTGGAACAGAGTCTCAGAAAACTAGGCGTGGAGAGGCTTAGTAAAGACGATGTCCAGAAAATGCAGTGGGAGGCTTTAGAGGCTAAGATTGGGAATTGGATTCATCACATGCGTATTGCGGTCAAGCTGTTGTTGTCGGGGGAAAGGAAAATATGCGATCAAATATTTGAGGGTGTTGATTCTCTCAGGGATCAATGCTTTGCGGAAGTGACTGCGAACAGTGTGGCTGTGTTGCTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCGCCAGAAAAACTATTTGTTCTCTTGGACATGTATGAGATAATGAGGGAACTACAATCAGAGATTGAAACACTGTTTGGAAACAAAGCAAGCCTTGAAATGAGGGAAGCTGCATTGAGTTTGACGAAGCGTCTCGCTCTGACAGCCCAGGAAACTTTCGCTGACTTTGAAGAAGCAGTAGAAAAGGATGCAACAAAAACTGCTATTCTTGATGGAACTGTCCATCCCTTGACCAGCTACGTGATAAATTATGTTAAATTTCTATTCGATTATCAGTCTACTTTGAAGCTACTTTTTGAAGACTTTGATAGTAGTGATCCAGATGTTCAGTTAGCAAAGGTAACTACAAGGATTATGCTTGGTCTTCTTAATAACCTGGATGCGAAATCTAAGCAGTATAAAGACCAGGCATTGACTCAAATATTTCTCATGAACAACATTCACTATATAGTGAGATCAGTGAGAAGGTCTGAGGCAAAGGATGTGTTGGGAGATGATTGGGTACAAATACACCGAAGAATTGTCCAACAACATGCTAATCAGTATAAGAGAGTTTCATGGGCAAAGATTTTGCAGTGCCTCACTATTCAGGGCCTAAATCAGTCGGGCGGAGGCGATGCGGGCAGCAGTGGACTTTCAAGAGCAATGGTGAAAGAAAGGTTCAAGACATTTAATATTCAATTTGAAGAGCTTCATCAAAGACAGTCTCAGTGGACAGTTCCTGATAGCGAGTTGCGTGAATCGTTGAGGCTGGCCGTCGCTGAAGTCCTCTTGCCTGCATACAGATCTTTCGTCAAACGTTTCGGGCCAATGATCGAGAATGGGAAGAATCCTCAGAAATACATCAGATACACTCCTGAGAATCTTGAACGGATGTTGAATGACTTTTTTGAGGGTAAAACATTTGGTGAGCAGAAACGGTAA 1926 43.41 GSMGIPQAMEILSERAAFIRDSLQKSQTITNNMVDILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTVKAAEVILAQFDLSRKAEAKILRGPHEDLESYLEAIDQLRSIIRFFGGNKNFKSSDSVLNHTNNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSEISGHQSNATSKGSSMHQSKRLETAVYTPLSLIPNRVVPLLHDLAQQMVQAGHQQQLLRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHHMRIAVKLLLSGERKICDQIFEGVDSLRDQCFAEVTANSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEIETLFGNKASLEMREAALSLTKRLALTAQETFADFEEAVEKDATKTAILDGTVHPLTSYVINYVKFLFDYQSTLKLLFEDFDSSDPDVQLAKVTTRIMLGLLNNLDAKSKQYKDQALTQIFLMNNIHYIVRSVRRSEAKDVLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLTIQGLNQSGGGDAGSSGLSRAMVKERFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPMIENGKNPQKYIRYTPENLERMLNDFFEGKTFGEQKR 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74410799 74415960 + Bma002793.1 Bma01g02005 76522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02005 641 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 38 638 - -
Bma01g02005 641 MobiDBLite consensus disorder prediction 175 194 - -
Bma01g02005 641 Coils Coil 349 369 - -
Bma01g02005 641 Pfam Exo70 exocyst complex subunit 276 629 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma01g02005 641 Coils Coil 134 154 - -
Bma01g02005 641 SUPERFAMILY Cullin repeat-like 78 632 IPR016159 -
Bma01g02005 641 Gene3D Exocyst complex component Exo70 76 641 - -
Bma01g02005 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 38 638 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02005 Bma-Chr1:74410799 Bma08g00906 Bma-Chr8:47947222 0 dispersed
Bma01g02121 Bma-Chr1:77629710 Bma01g02005 Bma-Chr1:74410799 5.22E-66 dispersed
Bma01g02005 Bma-Chr1:74410799 Bma15g00313 Bma-Chr15:3022118 4.43E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02005 K07195 - mnt:21385810 1063.91