Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02011 ATGGCGACGTACTTCCATGGAAACTCCGAAATCCAACCGCCTGACGGATTGCAAACCCTAATCCTGATGAATCCCGGCTACATCCAGTACTCCGACACACCCCCACCGGCCTCTAGCAACCTAGTATTCTTCAACTCTCATGTCGGGAATCCTCTCTATTTGCCCAATCTGCCTCACGCGCCGCTATCGCAACCTCAGCACTTGGTTGGTATCCCTCTTTCCGCCGCCACCACCTCGGACCCGAACTCTCTATCCTCGCACAGCCACCATGATGTTTCTCCCTTGCATGGCTTCATCCAACGCTCCCAAAATAGGTTTTGTAGCTCAAATGATCATCTCTCGACGGTGGCGCGTGATAGCCCACGCCCTAAGGAAGGACTGTCCCTTACCCTCTCATCTCATCAGCCAGGGTATGGATTAGTCCGAATTCCATCTGAAGCTCAACAGGAAGTTTCCGGCGAGGATGTGCACATTGCAGGTGGATCCTCCTCTGCTTCCGGCGTCTCACTTCCGGCAGTGCGGAGCATATCACTGAGCTCGAAGTACTCAAGAGCGGCTCAGGAGCTTCTTGATGAGGTGGCAAACGTCGGCAATAATGGAGTTAAGAAAGAGACCTTGAAGAAGGCCGATGATCGACGGACTAAGCAGGAGGAAGAGTCATTGGCACTCGCCAGAGACAAAACGGATGGAGTGGAAGACACAGCGAAGACCAGTCCAGAGCTTTCGGCCGCCGAGAGGCAAGAAATTCAGATGAAGAAGGCCAAGTTTATTAACATGCTTGATGAGGTGGAGCAAAGATACAGACGGTATCATCATCAAATGCAGATTCTGGTTTCCTCTTTCGAACAAGCAGTTGGAATAGGCTCTGCAAGAACTTACACAGCCCTCGCGCTTCAGACCATCTCGAAGCAATTCAGATGCTTAAAAGACGCAATCAATGTCCAAATTCAAGTGGCAAACAAGAACTTAGGCAAAGAGGACTGCCATGGCAGCAAACTAAGACTTGTAGACCATCAGTTTCATCAACAACGGGCTCTACAGAACTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAGAGATCGGTTTCTGTTCTTCGAGCCTGGCTATTCGAACATTTTCTTCACCCGTATCCAAAAGATTCAGACAAGCAAATGCTGGCGAGACAGACAGGACTCGCTAGGAGTCAGGTTTCAAATTGGTTCATCAATGCTCGAGTTCGTCTGTGGAAGCCGATGGTAGAAGACATGTACATGGAAGAAATCAAGGAGCGAGAACAGAACTTATCAGCAGACAAAACCAGCAAGAACAATGAGAATACGACTTCCAAATTCACAACACCAACTCCACAAGACAAAAATCATGCAATTGATAACCAGCTTCCGAGTTTCAACTCAAAACAGGACGATCTTTCCCATCTTCACCCTCGCCCGGCAATTTCCTTTTCTTCATCGGCTTCGTCACTGGAAGCTGTAAATGTTCGAAGCCAATCTGGGTTTTGGCTAATTGGGTCATCGGAACTTGATGGAATCACACAAGGAAGTCCAAAGAGACAACGGATTGATGAACTGATGCAGTCCCCAAACAGTATTCCTATAAACATTGACGCTAAGCCAGGGGAAGCCAATAATGAGCACATTCCAATGAAGTTTAACAGCGATAGGCATGGCAGAGATGGATATTCCATCATTGCAGGTCAAGCTAATTTCATTGGAGGTTTCGAGCAGTACCCAATTACAGATATTGAAAGGTTTGATGCTGAGCCATTCACAACAGGATTTTCCGGCAATGGTGTTTCTCTCACTCTTGGTCTTCCCCACTCTGAAAATCTCACGCTATCGGTTGCCAACCATACTTTCCTTCCAAATCAAAACATAAATTTTGGAAGAAACGGTTTCGACCCTATTGACATATCAACACCACACTCTACATCTGCATTCGGGAACATCGATGTACAAAACCGAAAACAATTGGTTGCACAATTGTTGCCCGACTTTGTGACCTGA 2022 47.53 MATYFHGNSEIQPPDGLQTLILMNPGYIQYSDTPPPASSNLVFFNSHVGNPLYLPNLPHAPLSQPQHLVGIPLSAATTSDPNSLSSHSHHDVSPLHGFIQRSQNRFCSSNDHLSTVARDSPRPKEGLSLTLSSHQPGYGLVRIPSEAQQEVSGEDVHIAGGSSSASGVSLPAVRSISLSSKYSRAAQELLDEVANVGNNGVKKETLKKADDRRTKQEEESLALARDKTDGVEDTAKTSPELSAAERQEIQMKKAKFINMLDEVEQRYRRYHHQMQILVSSFEQAVGIGSARTYTALALQTISKQFRCLKDAINVQIQVANKNLGKEDCHGSKLRLVDHQFHQQRALQNLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLARQTGLARSQVSNWFINARVRLWKPMVEDMYMEEIKEREQNLSADKTSKNNENTTSKFTTPTPQDKNHAIDNQLPSFNSKQDDLSHLHPRPAISFSSSASSLEAVNVRSQSGFWLIGSSELDGITQGSPKRQRIDELMQSPNSIPINIDAKPGEANNEHIPMKFNSDRHGRDGYSIIAGQANFIGGFEQYPITDIERFDAEPFTTGFSGNGVSLTLGLPHSENLTLSVANHTFLPNQNINFGRNGFDPIDISTPHSTSAFGNIDVQNRKQLVAQLLPDFVT 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74608352 74610693 + Bma002804.1 Bma01g02011 76528

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02011 673 Coils Coil 246 266 - -
Bma01g02011 673 SMART HOX_1 357 421 IPR001356 GO:0003677
Bma01g02011 673 MobiDBLite consensus disorder prediction 438 466 - -
Bma01g02011 673 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 638 - -
Bma01g02011 673 CDD homeodomain 357 418 IPR001356 GO:0003677
Bma01g02011 673 Pfam Homeobox KN domain 374 413 IPR008422 GO:0003677|GO:0006355
Bma01g02011 673 Pfam Associated with HOX 178 312 IPR006563 -
Bma01g02011 673 SMART prehox3 170 314 IPR006563 -
Bma01g02011 673 MobiDBLite consensus disorder prediction 205 242 - -
Bma01g02011 673 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 638 - -
Bma01g02011 673 MobiDBLite consensus disorder prediction 431 466 - -
Bma01g02011 673 Gene3D - 353 432 - -
Bma01g02011 673 SUPERFAMILY Homeodomain-like 358 424 IPR009057 -
Bma01g02011 673 Coils Coil 424 444 - -
Bma01g02011 673 MobiDBLite consensus disorder prediction 205 234 - -
Bma01g02011 673 ProSiteProfiles 'Homeobox' domain profile. 354 417 IPR001356 GO:0003677
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02011 - - - jre:108982860 789.645
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma01g02011 Bma04g01538 CCT
Bma01g02011 Bma10g00129 CCT
Bma01g02011 Bma04g00527 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02011 Bma-Chr1:74608352 Bma01g02340 Bma-Chr1:81010313 1.04E-88 dispersed
Bma01g02011 Bma-Chr1:74608352 Bma10g00129 Bma-Chr10:1167298 0 wgd
Bma01g02011 Bma-Chr1:74608352 Bma04g00527 Bma-Chr4:4641565 0 wgd
Bma01g02011 Bma-Chr1:74608352 Bma04g01538 Bma-Chr4:51436269 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g238 Blo01g01247 Blo12g00539 Bda01g00423 Bda03g00660 Bpe04g01489 Bpe03g01193 Bma04g01538 Bma10g00129 Cmo06g00525 Cmo14g00358 . . . . . . Cpe08g00966 . . . . . . . . . . . . . . . . . . . . . Cme04g02323 Blo07g01167 Blo09g00467 Bda03g01628 Bda05g01130 Bpe04g00620 Bpe02g00702 Bma01g02011 Bma04g00527 . . . Cma06g00526 Cma14g00361 Car06g00463 Car14g00330 Cpe03g00311 . . . . . . . . Cla10g01741 Cam10g1793 Cec10g1845 Cco10g1818 Clacu10g1809 Cmu10g2559 Cre10g1946 Lsi03g01817 Csa03g03494 Chy04g01857 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma02g01044 CCT,ECH 1 567 Homeobox Transcription Factor Family AT4G00730 58.6 8.9e-166 580.5
Bma06g01236 . 1 567 Homeobox Transcription Factor Family AT4G00730 55.2 3.9e-161 565.1
Bma05g00972 BCT,CCT,ECH 1 535 Homeobox Transcription Factor Family AT4G00730 59.0 3.8e-156 548.5
Bma04g01080 BCT,CCT,ECH 22 505 Homeobox Transcription Factor Family AT4G00730 58.0 2.1e-146 516.2
Bma10g01213 . 1 140 Homeobox Transcription Factor Family AT4G00730 72.9 2.2e-55 213.8
Bma01g00927 . 11 270 Homeobox Transcription Factor Family AT4G32980 57.5 1.5e-73 273.9
Bma14g01528 . 15 256 Homeobox Transcription Factor Family AT3G01470 53.6 2.2e-45 179.5
Bma10g00774 CCT,ECH 104 755 Homeobox Transcription Factor Family AT1G79840 65.3 3.7e-235 811.2
Bma13g00826 . 103 739 Homeobox Transcription Factor Family AT1G79840 60.4 1.4e-218 756.1
Bma06g00675 BCT,CCT,ECH 4 282 Homeobox Transcription Factor Family AT1G69780 63.4 4.3e-71 265.0
Bma14g01636 CCT,ECH 1 279 Homeobox Transcription Factor Family AT1G69780 60.6 1.6e-70 263.1
Bma14g01608 . 1 279 Homeobox Transcription Factor Family AT1G69780 60.2 3.6e-70 261.9
Bma01g00088 BCT,CCT,ECH 4 285 Homeobox Transcription Factor Family AT1G69780 63.0 8.1e-70 260.8
Bma11g00442 . 4 865 Homeobox Transcription Factor Family AT2G34710 75.2 0.0e+00 1288.9
Bma07g00448 . 4 868 Homeobox Transcription Factor Family AT2G34710 73.8 0.0e+00 1269.2
Bma07g01495 BCT 18 854 Homeobox Transcription Factor Family AT2G34710 64.7 4.4e-310 1060.4
Bma14g00456 BCT 18 801 Homeobox Transcription Factor Family AT2G34710 64.8 6.3e-301 1030.0
Bma04g00411 BCT 46 905 Homeobox Transcription Factor Family AT2G34710 60.7 1.6e-291 998.8
Bma01g02558 BCT 16 736 Homeobox Transcription Factor Family AT2G34710 53.6 6.7e-234 807.4
Bma15g00354 CCT,ECH 18 462 Homeobox Transcription Factor Family AT2G34710 66.9 4.0e-170 595.5
Bma11g00466 . 1 296 Homeobox Transcription Factor Family AT2G34710 72.1 4.6e-118 422.5
Bma04g00411 BCT 37 849 Homeobox Transcription Factor Family AT1G52150 70.3 0.0e+00 1140.9
Bma11g00442 . 14 817 Homeobox Transcription Factor Family AT1G52150 63.0 4.4e-288 987.3
Bma07g00448 . 14 820 Homeobox Transcription Factor Family AT1G52150 62.7 2.0e-285 978.4
Bma07g01495 BCT 23 804 Homeobox Transcription Factor Family AT1G52150 63.0 9.8e-280 959.5
Bma01g02558 BCT 7 697 Homeobox Transcription Factor Family AT1G52150 62.1 3.5e-269 924.5
Bma14g00456 BCT 23 752 Homeobox Transcription Factor Family AT1G52150 62.1 6.6e-268 920.2
Bma15g00354 CCT,ECH 18 484 Homeobox Transcription Factor Family AT1G52150 81.3 4.8e-218 754.6
Bma11g00466 . 1 248 Homeobox Transcription Factor Family AT1G52150 60.9 2.5e-81 300.4
Bma12g00657 . 1 231 Homeobox Transcription Factor Family AT4G16780 68.2 6.6e-77 284.3
Bma05g00746 . 8 277 Homeobox Transcription Factor Family AT4G16780 56.4 9.5e-68 253.8
Bma10g00168 . 86 267 Homeobox Transcription Factor Family AT4G16780 64.7 1.1e-50 197.2
Bma06g00325 . 63 240 Homeobox Transcription Factor Family AT4G16780 60.2 5.8e-49 191.4
Bma15g00444 . 110 331 Homeobox Transcription Factor Family AT4G16780 53.9 3.8e-48 188.7
Bma03g01175 . 59 240 Homeobox Transcription Factor Family AT4G16780 58.1 4.6e-46 181.8
Bma15g01097 . 24 224 Homeobox Transcription Factor Family AT4G16780 54.5 2.5e-44 176.0
Bma12g00657 . 4 217 Homeobox Transcription Factor Family AT2G44910 62.3 5.5e-64 241.5
Bma05g00746 . 129 248 Homeobox Transcription Factor Family AT2G44910 89.2 1.2e-55 213.8
Bma10g00168 . 76 268 Homeobox Transcription Factor Family AT2G44910 55.9 7.2e-48 188.0
Bma15g00444 . 116 319 Homeobox Transcription Factor Family AT2G44910 56.1 2.1e-47 186.4
Bma06g00325 . 76 241 Homeobox Transcription Factor Family AT2G44910 55.3 6.3e-44 174.9
Bma03g01175 . 82 240 Homeobox Transcription Factor Family AT2G44910 57.7 9.1e-43 171.0
Bma15g01097 . 104 224 Homeobox Transcription Factor Family AT2G44910 67.8 3.2e-40 162.5
Bma04g00411 BCT 46 905 Homeobox Transcription Factor Family AT4G32880 72.5 0.0e+00 1229.5
Bma07g00448 . 14 868 Homeobox Transcription Factor Family AT4G32880 62.0 4.4e-299 1023.8
Bma11g00442 . 14 865 Homeobox Transcription Factor Family AT4G32880 62.1 1.3e-298 1022.3
Bma07g01495 BCT 14 854 Homeobox Transcription Factor Family AT4G32880 61.0 5.6e-286 980.3
Bma01g02558 BCT 12 736 Homeobox Transcription Factor Family AT4G32880 62.9 2.1e-285 978.4
Bma14g00456 BCT 14 801 Homeobox Transcription Factor Family AT4G32880 59.7 3.4e-275 944.5
Bma15g00354 CCT,ECH 18 464 Homeobox Transcription Factor Family AT4G32880 80.2 1.6e-211 733.0
Bma11g00466 . 1 296 Homeobox Transcription Factor Family AT4G32880 60.9 5.4e-95 345.9
Bma11g00442 . 7 865 Homeobox Transcription Factor Family AT1G30490 72.7 0.0e+00 1229.9
Bma07g00448 . 7 868 Homeobox Transcription Factor Family AT1G30490 71.8 0.0e+00 1209.1
Bma07g01495 BCT 23 854 Homeobox Transcription Factor Family AT1G30490 65.5 5.0e-306 1047.0
Bma14g00456 BCT 5 801 Homeobox Transcription Factor Family AT1G30490 63.2 3.1e-292 1001.1
Bma04g00411 BCT 39 905 Homeobox Transcription Factor Family AT1G30490 58.0 3.5e-275 944.5
Bma01g02558 BCT 9 736 Homeobox Transcription Factor Family AT1G30490 51.5 9.9e-222 766.9
Bma15g00354 CCT,ECH 9 462 Homeobox Transcription Factor Family AT1G30490 64.3 2.3e-162 569.7
Bma11g00466 . 1 296 Homeobox Transcription Factor Family AT1G30490 69.7 1.9e-108 390.6
Bma12g00798 BCT 1 655 Homeobox Transcription Factor Family AT4G21750 75.1 5.0e-289 990.3
Bma02g01326 BCT 1 734 Homeobox Transcription Factor Family AT4G21750 67.0 2.5e-280 961.4
Bma06g01236 . 121 820 Homeobox Transcription Factor Family AT4G21750 54.9 5.1e-209 724.5
Bma02g01044 CCT,ECH 91 820 Homeobox Transcription Factor Family AT4G21750 53.2 1.1e-203 706.8
Bma12g01265 . 26 699 Homeobox Transcription Factor Family AT4G21750 50.3 1.8e-185 646.4
Bma04g01677 . 2 331 Homeobox Transcription Factor Family AT4G21750 66.6 3.1e-129 459.5
Bma07g00005 . 2 331 Homeobox Transcription Factor Family AT4G21750 66.3 1.7e-127 453.8
Bma10g01213 . 3 382 Homeobox Transcription Factor Family AT4G21750 55.8 7.8e-117 418.3
Bma04g01538 BCT,CCT 246 441 Homeobox Transcription Factor Family AT5G41410 54.0 2.1e-59 227.3
Bma04g00527 BCT,CCT 247 445 Homeobox Transcription Factor Family AT5G41410 51.9 8.6e-58 221.9
Bma01g02011 BCT,CCT 236 435 Homeobox Transcription Factor Family AT5G41410 51.2 8.1e-56 215.3
Bma01g02340 . 228 418 Homeobox Transcription Factor Family AT5G41410 56.9 1.1e-55 214.9
Bma04g00222 CCT,ECH 208 394 Homeobox Transcription Factor Family AT5G41410 54.4 1.5e-49 194.5
Bma03g01078 CCT,ECH 107 398 Homeobox Transcription Factor Family AT4G36870 61.6 8.0e-95 344.7
Bma14g00602 . 228 452 Homeobox Transcription Factor Family AT4G36870 52.6 4.0e-62 236.1
Bma07g01658 . 40 263 Homeobox Transcription Factor Family AT4G36870 53.1 8.9e-62 235.0
Bma01g02340 . 152 395 Homeobox Transcription Factor Family AT1G75410 54.3 4.2e-61 232.3
Bma04g01538 BCT,CCT 165 413 Homeobox Transcription Factor Family AT1G75410 51.9 1.7e-57 220.3
Bma04g00527 BCT,CCT 187 413 Homeobox Transcription Factor Family AT1G75410 52.1 1.9e-53 206.8
Bma10g00129 BCT,CCT 174 412 Homeobox Transcription Factor Family AT1G75410 50.4 5.5e-53 205.3
Bma09g00348 CCT,ECH 357 515 Homeobox Transcription Factor Family AT1G75410 53.5 1.2e-39 161.0
Bma09g00348 CCT,ECH 269 738 Homeobox Transcription Factor Family AT2G23760 50.2 4.9e-94 342.4
Bma03g01078 CCT,ECH 170 401 Homeobox Transcription Factor Family AT2G23760 56.6 6.6e-83 305.4
Bma04g00222 CCT,ECH 128 397 Homeobox Transcription Factor Family AT1G19700 56.8 4.9e-73 272.3
Bma04g00527 BCT,CCT 187 453 Homeobox Transcription Factor Family AT1G19700 53.4 4.0e-67 252.7
Bma01g00745 BCT,CCT,ECH 154 409 Homeobox Transcription Factor Family AT1G19700 50.9 1.8e-59 227.3
Bma07g01658 . 90 295 Homeobox Transcription Factor Family AT1G19700 51.9 9.6e-53 204.9
Bma12g00657 . 5 216 Homeobox Transcription Factor Family AT4G17460 68.5 5.0e-69 258.1
Bma05g00746 . 10 269 Homeobox Transcription Factor Family AT4G17460 52.7 1.0e-58 223.8
Bma10g00168 . 21 268 Homeobox Transcription Factor Family AT4G17460 52.1 1.8e-50 196.4
Bma15g01097 . 65 224 Homeobox Transcription Factor Family AT4G17460 57.9 5.4e-39 158.3
Bma12g00657 . 6 231 Homeobox Transcription Factor Family AT5G47370 66.0 4.9e-72 268.1
Bma05g00746 . 10 277 Homeobox Transcription Factor Family AT5G47370 51.8 1.6e-59 226.5
Bma10g00168 . 21 275 Homeobox Transcription Factor Family AT5G47370 50.4 2.4e-50 196.1
Bma15g00444 . 84 297 Homeobox Transcription Factor Family AT5G47370 53.0 3.0e-45 179.1
Bma15g01097 . 99 225 Homeobox Transcription Factor Family AT5G47370 67.2 1.6e-38 156.8
Bma06g00325 . 5 267 Homeobox Transcription Factor Family AT4G37790 61.3 9.3e-84 307.0
Bma03g01175 . 1 267 Homeobox Transcription Factor Family AT4G37790 61.5 7.9e-83 303.9
Bma15g01097 . 1 263 Homeobox Transcription Factor Family AT4G37790 55.0 7.9e-67 250.8
Bma10g00168 . 103 268 Homeobox Transcription Factor Family AT4G37790 61.9 6.7e-50 194.5
Bma12g00657 . 27 191 Homeobox Transcription Factor Family AT4G37790 64.0 3.7e-48 188.7
Bma15g00444 . 156 317 Homeobox Transcription Factor Family AT4G37790 64.2 1.4e-47 186.8
Bma05g00746 . 129 249 Homeobox Transcription Factor Family AT4G37790 75.2 1.7e-45 179.9
Bma12g00657 . 3 216 Homeobox Transcription Factor Family AT3G60390 66.8 2.4e-67 252.7
Bma05g00746 . 131 270 Homeobox Transcription Factor Family AT3G60390 74.8 1.1e-53 207.2
Bma10g00168 . 62 268 Homeobox Transcription Factor Family AT3G60390 54.7 5.8e-50 194.9
Bma15g00444 . 116 298 Homeobox Transcription Factor Family AT3G60390 58.9 2.9e-49 192.6
Bma06g00325 . 63 239 Homeobox Transcription Factor Family AT3G60390 55.2 1.1e-45 180.6
Bma03g01175 . 82 239 Homeobox Transcription Factor Family AT3G60390 60.2 2.8e-44 176.0
Bma15g01097 . 65 224 Homeobox Transcription Factor Family AT3G60390 59.0 9.0e-43 171.0
Bma05g00672 . 288 570 Homeobox Transcription Factor Family AT3G19510 51.6 1.0e-81 301.6
Bma06g00325 . 1 267 Homeobox Transcription Factor Family AT2G22800 58.9 5.4e-76 281.2
Bma03g01175 . 1 267 Homeobox Transcription Factor Family AT2G22800 56.5 4.0e-71 265.0
Bma15g01097 . 1 263 Homeobox Transcription Factor Family AT2G22800 53.8 5.2e-63 238.0
Bma10g00168 . 104 268 Homeobox Transcription Factor Family AT2G22800 61.3 6.9e-47 184.5
Bma12g00657 . 27 191 Homeobox Transcription Factor Family AT2G22800 63.9 4.4e-46 181.8
Bma15g00444 . 156 297 Homeobox Transcription Factor Family AT2G22800 65.5 5.8e-46 181.4
Bma05g00746 . 129 249 Homeobox Transcription Factor Family AT2G22800 72.7 3.2e-44 175.6
Bma06g01236 . 1 820 Homeobox Transcription Factor Family AT3G61150 63.6 3.4e-280 961.1
Bma02g01044 CCT,ECH 1 820 Homeobox Transcription Factor Family AT3G61150 63.7 9.4e-278 953.0
Bma05g00972 BCT,CCT,ECH 12 792 Homeobox Transcription Factor Family AT3G61150 61.9 1.2e-256 882.9
Bma12g00798 BCT 1 654 Homeobox Transcription Factor Family AT3G61150 51.0 1.5e-187 653.3
Bma04g01080 BCT,CCT,ECH 21 648 Homeobox Transcription Factor Family AT3G61150 50.5 2.9e-178 622.5
Bma10g01213 . 3 383 Homeobox Transcription Factor Family AT3G61150 66.3 1.1e-148 524.2
Bma11g00018 . 99 346 Homeobox Transcription Factor Family AT4G08150 55.4 1.3e-75 280.4
Bma08g00095 . 77 307 Homeobox Transcription Factor Family AT4G08150 55.7 1.7e-70 263.5
Bma14g01797 . 80 311 Homeobox Transcription Factor Family AT4G08150 51.4 8.1e-65 244.6
Bma06g00609 . 77 315 Homeobox Transcription Factor Family AT4G08150 50.6 2.7e-60 229.6
Bma07g00020 . 83 298 Homeobox Transcription Factor Family AT4G08150 52.2 2.4e-53 206.5
Bma06g00609 . 1 317 Homeobox Transcription Factor Family AT1G70510 57.8 1.4e-96 349.7
Bma14g01797 . 1 310 Homeobox Transcription Factor Family AT1G70510 58.0 3.1e-96 348.6
Bma08g00095 . 1 302 Homeobox Transcription Factor Family AT1G70510 51.7 6.8e-83 304.3
Bma11g00018 . 93 325 Homeobox Transcription Factor Family AT1G70510 50.4 1.9e-64 243.0
Bma04g00080 . 165 462 Homeobox Transcription Factor Family AT5G25220 79.1 3.5e-135 478.4
Bma07g01627 BCT 35 308 Homeobox Transcription Factor Family AT5G25220 67.3 3.8e-97 352.1
Bma14g00577 BCT 14 274 Homeobox Transcription Factor Family AT5G25220 59.0 1.0e-86 317.4
Bma04g00080 . 172 456 Homeobox Transcription Factor Family AT5G11060 79.3 4.6e-129 458.0
Bma07g01627 BCT 35 307 Homeobox Transcription Factor Family AT5G11060 66.1 2.2e-94 342.8
Bma14g00577 BCT 15 273 Homeobox Transcription Factor Family AT5G11060 57.0 8.5e-83 304.3
Bma04g00080 . 97 450 Homeobox Transcription Factor Family AT4G32040 60.4 1.0e-109 393.7
Bma07g01627 BCT 28 293 Homeobox Transcription Factor Family AT4G32040 61.0 2.5e-84 309.3
Bma14g00577 BCT 29 259 Homeobox Transcription Factor Family AT4G32040 54.2 1.2e-70 263.8
Bma14g01797 . 1 313 Homeobox Transcription Factor Family AT1G23380 63.5 1.1e-107 386.7
Bma06g00609 . 1 317 Homeobox Transcription Factor Family AT1G23380 62.0 5.1e-105 377.9
Bma08g00095 . 1 308 Homeobox Transcription Factor Family AT1G23380 56.1 1.4e-91 333.2
Bma11g00018 . 89 325 Homeobox Transcription Factor Family AT1G23380 52.0 1.1e-67 253.8
Bma07g01627 BCT 1 307 Homeobox Transcription Factor Family AT1G62990 73.2 1.3e-120 429.5
Bma14g00577 BCT 1 273 Homeobox Transcription Factor Family AT1G62990 67.5 1.4e-106 382.9
Bma04g00080 . 191 461 Homeobox Transcription Factor Family AT1G62990 63.4 5.5e-95 344.4
Bma07g00903 . 12 778 Homeobox Transcription Factor Family AT4G17710 50.3 3.7e-185 645.2
Bma14g01636 CCT,ECH 1 279 Homeobox Transcription Factor Family AT1G26960 58.0 1.7e-60 229.6
Bma14g01608 . 1 279 Homeobox Transcription Factor Family AT1G26960 57.3 5.0e-60 228.0
Bma06g00675 BCT,CCT,ECH 4 282 Homeobox Transcription Factor Family AT1G26960 57.4 1.1e-59 226.9
Bma01g00088 BCT,CCT,ECH 4 285 Homeobox Transcription Factor Family AT1G26960 56.6 7.3e-59 224.2
Bma06g00675 BCT,CCT,ECH 6 280 Homeobox Transcription Factor Family AT3G01220 51.1 6.5e-48 188.0
Bma12g01265 . 26 700 Homeobox Transcription Factor Family AT1G17920 63.9 4.6e-233 804.3
Bma12g01265 . 26 698 Homeobox Transcription Factor Family AT1G73360 64.8 1.6e-244 842.4
Bma01g00478 . 28 180 Homeobox Transcription Factor Family AT1G70920 61.4 1.2e-41 166.4
Bma12g00798 BCT 1 655 Homeobox Transcription Factor Family AT1G05230 82.5 5.2e-304 1040.0
Bma02g01326 BCT 1 734 Homeobox Transcription Factor Family AT1G05230 74.6 2.2e-302 1034.6
Bma02g01044 CCT,ECH 92 820 Homeobox Transcription Factor Family AT1G05230 54.0 8.0e-204 707.2
Bma06g01236 . 92 820 Homeobox Transcription Factor Family AT1G05230 51.3 3.1e-200 695.3
Bma05g00972 BCT,CCT,ECH 92 791 Homeobox Transcription Factor Family AT1G05230 51.3 1.2e-183 640.2
Bma10g01213 . 3 382 Homeobox Transcription Factor Family AT1G05230 56.5 3.0e-118 422.9
Bma04g01677 . 3 331 Homeobox Transcription Factor Family AT1G05230 60.0 1.0e-113 407.9
Bma07g00005 . 3 331 Homeobox Transcription Factor Family AT1G05230 60.0 6.5e-113 405.2
Bma06g00130 . 12 197 Homeobox Transcription Factor Family AT2G18550 51.3 1.0e-37 153.7
Bma12g00798 BCT 1 655 Homeobox Transcription Factor Family AT2G32370 54.8 7.5e-194 674.1
Bma02g01326 BCT 43 734 Homeobox Transcription Factor Family AT2G32370 52.1 6.6e-190 661.0
Bma06g00130 . 50 202 Homeobox Transcription Factor Family AT4G36740 60.8 4.5e-41 164.9
Bma06g01236 . 90 817 Homeobox Transcription Factor Family AT5G52170 51.8 1.7e-195 679.5
Bma02g01044 CCT,ECH 90 817 Homeobox Transcription Factor Family AT5G52170 51.0 2.1e-193 672.5
Bma05g00972 BCT,CCT,ECH 81 789 Homeobox Transcription Factor Family AT5G52170 50.8 9.0e-189 657.1
Bma10g01213 . 2 384 Homeobox Transcription Factor Family AT5G52170 59.3 2.5e-130 463.0
Bma07g00903 . 8 777 Homeobox Transcription Factor Family AT5G46880 55.8 7.9e-240 827.0
Bma11g00420 . 17 1468 Homeobox Transcription Factor Family AT1G28420 51.1 0.0e+00 1107.8
Bma01g00745 BCT,CCT,ECH 153 359 Homeobox Transcription Factor Family AT1G75430 53.0 1.6e-54 209.9
Bma05g00135 BCT,CCT,ECH 163 366 Homeobox Transcription Factor Family AT1G75430 51.4 6.3e-51 198.0
Bma01g02340 . 104 433 Homeobox Transcription Factor Family AT2G16400 52.4 7.0e-79 291.6
Bma04g00222 CCT,ECH 121 395 Homeobox Transcription Factor Family AT2G16400 58.5 1.0e-77 287.7
Bma04g00527 BCT,CCT 174 457 Homeobox Transcription Factor Family AT2G16400 55.7 1.5e-76 283.9
Bma10g00129 BCT,CCT 172 472 Homeobox Transcription Factor Family AT2G16400 52.8 2.7e-75 279.6
Bma01g02011 BCT,CCT 180 478 Homeobox Transcription Factor Family AT2G16400 51.6 6.3e-72 268.5
Bma14g00602 . 230 485 Homeobox Transcription Factor Family AT2G16400 50.4 1.1e-60 231.1
Bma07g01658 . 42 291 Homeobox Transcription Factor Family AT2G16400 50.2 6.2e-59 225.3
Bma04g01538 BCT,CCT 161 450 Homeobox Transcription Factor Family AT2G27220 51.0 5.0e-68 255.4
Bma04g00527 BCT,CCT 150 441 Homeobox Transcription Factor Family AT2G27220 50.3 1.0e-65 247.7
Bma01g02340 . 165 418 Homeobox Transcription Factor Family AT2G35940 54.9 1.9e-66 250.8
Bma04g00222 CCT,ECH 148 394 Homeobox Transcription Factor Family AT2G35940 54.5 3.4e-63 240.0
Bma04g01264 BCT 304 462 Homeobox Transcription Factor Family AT2G35940 52.9 1.9e-42 171.0
Bma14g00602 . 311 484 Homeobox Transcription Factor Family AT4G34610 59.8 6.2e-52 202.2
Bma07g01658 . 122 316 Homeobox Transcription Factor Family AT4G34610 55.0 6.8e-51 198.7
Bma12g00829 . 16 1435 Homeobox Transcription Factor Family AT5G44180 50.9 9.7e-301 1030.4
Bma12g00798 BCT 1 653 Homeobox Transcription Factor Family AT4G04890 76.8 2.9e-289 991.1
Bma02g01326 BCT 1 732 Homeobox Transcription Factor Family AT4G04890 70.2 4.3e-285 977.2
Bma06g01236 . 91 819 Homeobox Transcription Factor Family AT4G04890 53.8 2.6e-213 738.8
Bma02g01044 CCT,ECH 91 819 Homeobox Transcription Factor Family AT4G04890 53.6 1.1e-208 723.4
Bma05g00972 BCT,CCT,ECH 84 791 Homeobox Transcription Factor Family AT4G04890 50.7 1.2e-189 660.2
Bma12g01265 . 26 697 Homeobox Transcription Factor Family AT4G04890 51.0 1.3e-188 656.8
Bma04g01677 . 3 331 Homeobox Transcription Factor Family AT4G04890 69.1 1.3e-129 460.7
Bma07g00005 . 3 331 Homeobox Transcription Factor Family AT4G04890 68.8 7.4e-128 454.9
Bma10g01213 . 3 382 Homeobox Transcription Factor Family AT4G04890 56.4 1.5e-120 430.6
Bma01g00392 . 141 561 Homeobox Transcription Factor Family AT4G29940 56.4 1.4e-134 477.2
Bma07g01495 BCT 1 854 Homeobox Transcription Factor Family AT5G60690 76.7 0.0e+00 1284.2
Bma14g00456 BCT 1 801 Homeobox Transcription Factor Family AT5G60690 76.7 0.0e+00 1264.2
Bma11g00442 . 8 865 Homeobox Transcription Factor Family AT5G60690 64.2 2.8e-309 1057.7
Bma07g00448 . 1 868 Homeobox Transcription Factor Family AT5G60690 62.7 6.5e-306 1046.6
Bma04g00411 BCT 37 906 Homeobox Transcription Factor Family AT5G60690 57.1 6.3e-277 950.3
Bma01g02558 BCT 7 737 Homeobox Transcription Factor Family AT5G60690 52.4 4.3e-225 778.1
Bma15g00354 CCT,ECH 14 462 Homeobox Transcription Factor Family AT5G60690 65.7 6.5e-165 578.2
Bma11g00466 . 1 296 Homeobox Transcription Factor Family AT5G60690 59.3 9.6e-92 335.1
Bma11g00018 . 92 352 Homeobox Transcription Factor Family AT1G62360 74.4 9.4e-111 397.1
Bma07g00020 . 1 298 Homeobox Transcription Factor Family AT1G62360 56.5 3.6e-86 315.5
Bma08g00095 . 69 305 Homeobox Transcription Factor Family AT1G62360 53.4 2.2e-67 253.1
Bma06g00609 . 80 314 Homeobox Transcription Factor Family AT1G62360 51.0 7.8e-57 218.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003189 3 2 3 3 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 2 1 1 4 2 1 51
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56754 PF07526 POX 9.10E-45 No_clan Bma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma01g02011 Bma_Chr01 FPKM 17.673986 22.08391 1.292475 1.227881 50.909439 47.377861 51.348286 1.305603 1.312608 0.935675