Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02014 | ATGAACGACTTGCTTTCCTCTACTTCATTCCCCAGGGATGAACACGTCATCGAGATGACAGGATCGCCGGCATCCTCTCCGGCTGGCCATATGAGGAAATTCTTCAACGACGTCGAAGCCATTAAGGAAGATCTTAGGGAGCTGGAACTCCTCCGTGAAAATCTGCAGAACTCTCACGAGAAGAGCAAAGCTCTTAACAGCCCTAAGGCGGTGAAAGAGCTCCGGTCAAAAATGGACGCGGACGTTTCTCTGGCTCTGAGCAAGGCGAAGCTGATCAAGGCTCAGCTCGAGGCTCTCGACCGATCAAACGTCGCGAATCGCAATTTGCCTGGTTGGGGCGTCGGGTCGTCGTCGGACCGAACGCGAACCTCTGTAGTGAATGGGCTGAGAAAGAATTTAAAGAACTCGATGGAGAGCTTTACCGCTCTGAGGGAGAAGATCTCGTCGGAGTATAGAGACACCGTGCAGCGGAGATATTTCACCGTCACCGGCGAAAATCCCGATGAGAAGACCATTGATCTATTGATCTCCACTGGCGAAAGCGAGACGTTCTTACAGAAAGCAATACAAGAGGCTGATTCGATGATCAAAGACGGTACCCGCCAGTTGCAGACGGCGAGGACCCTCCAGAAGAACACAAGAAAATGGATTATTATTGCCATCATCATTTTGCTGGTCATCATCTTCATTCGCCGTTCTCAGTGCTCAGCCATGGAAGTAGGAAGATCTCTTCTCTTGCGAGCCTTTGAGTGTGTACTGTTTTCCATTTTATTGGTTTCTTCTTCAAATCTTTCCATCCCCACGTGA | 807 | 49.81 | MNDLLSSTSFPRDEHVIEMTGSPASSPAGHMRKFFNDVEAIKEDLRELELLRENLQNSHEKSKALNSPKAVKELRSKMDADVSLALSKAKLIKAQLEALDRSNVANRNLPGWGVGSSSDRTRTSVVNGLRKNLKNSMESFTALREKISSEYRDTVQRRYFTVTGENPDEKTIDLLISTGESETFLQKAIQEADSMIKDGTRQLQTARTLQKNTRKWIIIAIIILLVIIFIRRSQCSAMEVGRSLLLRAFECVLFSILLVSSSNLSIPT | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 74718270 | 74719806 | + | Bma002809.1 | Bma01g02014 | 76531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02014 | 268 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bma01g02014 | 268 | Gene3D | - | 29 | 161 | - | - | |
Bma01g02014 | 268 | Pfam | Syntaxin | 33 | 195 | IPR006011 | GO:0016020 | |
Bma01g02014 | 268 | Gene3D | - | 168 | 232 | - | - | |
Bma01g02014 | 268 | SMART | SynN_4 | 26 | 152 | IPR006011 | GO:0016020 | |
Bma01g02014 | 268 | Coils | Coil | 31 | 65 | - | - | |
Bma01g02014 | 268 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 8 | 191 | - | - | |
Bma01g02014 | 268 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 192 | 243 | - | - | |
Bma01g02014 | 268 | PANTHER | SYNTAXIN | 8 | 191 | IPR045242 | - | |
Bma01g02014 | 268 | PANTHER | SYNTAXIN | 192 | 243 | IPR045242 | - | |
Bma01g02014 | 268 | SUPERFAMILY | t-snare proteins | 30 | 193 | IPR010989 | GO:0016020|GO:0016192 | |
Bma01g02014 | 268 | CDD | SynN | 31 | 188 | IPR006011 | GO:0016020 | |
Bma01g02014 | 268 | Pfam | SNARE domain | 189 | 230 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02014 | Bma-Chr1:74718270 | Bma07g00353 | Bma-Chr7:4463222 | 2.74E-65 | dispersed | |
Bma01g02014 | Bma-Chr1:74718270 | Bma10g00132 | Bma-Chr10:1190775 | 1.61E-91 | wgd | |
Bma01g02014 | Bma-Chr1:74718270 | Bma04g00526 | Bma-Chr4:4618116 | 4.38E-113 | wgd | |
Bma01g02014 | Bma-Chr1:74718270 | Bma04g01535 | Bma-Chr4:51364686 | 1.84E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02014 | K08486 | - | csv:101208931 | 268.085 |