Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02073 ATGGAGTTAAAAATTCAATCTTTGGGCAATATCCAAGAACAGGAAGAAGAAGAAGAAGGAGAAGACGAAGAAGAAAAGGAGGAGGAGAAGCATTTTCATGTGCTGGCGGTGGACGATAGTGTTTTAGACAGGAAGATATTGGAGAGACTGCTCAGAATTTCCTCATACAAAGCAGTTACATGTGTTGAATCTGGGGATAAAGCTCTCCAGTATTTGGGTCTGCTCGATAATTTACAAACCCCTTCTCCTTCTTCATCTTCTTCTTCTGCAACTTCTTCGCCGTCGTCTTCCCCACAATCATCAAATGCAGAGGGATTAAAGGTCAATTTAATCATGACGGACTACTGTATGCCCGGAATGAACGGCTATGATTTACTCAAGCGAATCAAGGGATCGCCCTGGAAAGACGTTCCAGTGATAGTGATGTCGTCGGAGAATGTACCTGCAAGAGTCACCATGTGCTTGGAAGGAGGGGCGGAGGAATTTCTGCTCAAGCCTCTCCAACTATCAGACTTGGAGAAGCTTCAACCCCATCTCTTGAAGTCTCTAAATCAGCCAACTCCGGCCCAAACCAGAGCTCCAGCCGGGAAGGACAACGCAGTGGCCGTCAAGAGCAGCAACAATGTTATCAAAAGAAAGGCCATGTCTCCAAAGCCCTCTGGGCCTGATAGAAGACCCAAAATGAAAGAGCTGGCTGTGGTTTAG 705 46.38 MELKIQSLGNIQEQEEEEEGEDEEEKEEEKHFHVLAVDDSVLDRKILERLLRISSYKAVTCVESGDKALQYLGLLDNLQTPSPSSSSSSATSSPSSSPQSSNAEGLKVNLIMTDYCMPGMNGYDLLKRIKGSPWKDVPVIVMSSENVPARVTMCLEGGAEEFLLKPLQLSDLEKLQPHLLKSLNQPTPAQTRAPAGKDNAVAVKSSNNVIKRKAMSPKPSGPDRRPKMKELAVV 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 76164242 76165446 + Bma002883.1 Bma01g02073 76590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02073 234 MobiDBLite consensus disorder prediction 80 104 - -
Bma01g02073 234 SUPERFAMILY CheY-like 32 181 IPR011006 -
Bma01g02073 234 ProSiteProfiles Response regulatory domain profile. 33 180 IPR001789 GO:0000160
Bma01g02073 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 15 233 - -
Bma01g02073 234 MobiDBLite consensus disorder prediction 183 234 - -
Bma01g02073 234 Coils Coil 8 31 - -
Bma01g02073 234 SMART REC_2 32 176 IPR001789 GO:0000160
Bma01g02073 234 MobiDBLite consensus disorder prediction 217 234 - -
Bma01g02073 234 Pfam Response regulator receiver domain 103 174 IPR001789 GO:0000160
Bma01g02073 234 MobiDBLite consensus disorder prediction 1 32 - -
Bma01g02073 234 Gene3D - 33 216 - -
Bma01g02073 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 233 IPR045279 GO:0009736
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02073 Bma-Chr1:76164242 Bma04g01468 Bma-Chr4:50428558 1.24E-55 dispersed
Bma01g02073 Bma-Chr1:76164242 Bma10g00231 Bma-Chr10:2091556 4.03E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56761 PF00072 Response_reg 2.80E-15 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02073 K14492 - rcu:8281066 263.462