Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma01g02091 | ATGCAGCTTTATCATCATCCATTCTCTTTGGACAGCCAAAAAGTGAGACTTGCTTTAGAAGAAAAAGGCATTGATTACACGTCTTACCATGTCAATCCTATTACAGGTAAGAACTTGGATTCCACATTCTTCAGGATGAACCCAACAGCCAAGCTCCCTGTTTTCCAGAATGGTGATCACATCATGTACGACACTATCGAAATTATCCAGTACATTGAAAGAATTTCTATTGTCACTTCGGGTAGCATAGACGAAAAGGCAACGAGCAGTAGCCAAGCCGTCGTCCAATGGATGCAGAAAATACAAGATTGGAATCCTAAATATTTCACCCTTAACTACATACCCGAAAAGTATCGACTCATGGTCACAAAATTCTTGAGGCGCGTAACGATTGCTCGACTGGCTGAATTGCCCGATCTTGCACCTGCTTACCACCGCAAACTAAGACAAGCCTACGAGACGGAAGACAAGTTGAAAAATTCAGATGCTGTGAAACAAAACATACAACACCTAAATCAACTTCTGGACGAAGTCGAAGCGAAGTTGTCGGAAAGTGCATATCTAGGCGGAGAAGAGTTTTCTATGGCAGATGTAATGCTCATTCCGGTCCTATCTCGGATAGTGATATTGAAGTTGGAAGAGTACATAAAAATCAGGCCAAATATTGCAGAGTATTGGTTGGTGGTGCAGGAGAGGCCAAGCTACAAGAAGGTGATCGGAAGGTACTTCAAGGGGTGGAGAAAGCACAAGACTCTAGTCAAAACCTGGTTTTTTGTACATTTCAGAAGCTTGCTGAAGAGGTTGTATGATGGACCAAATCTAGGAGTTGATGACATGAACCAGAAAGGCCAGAGACAAAAGAATTGA | 867 | 42.45 | MQLYHHPFSLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSTFFRMNPTAKLPVFQNGDHIMYDTIEIIQYIERISIVTSGSIDEKATSSSQAVVQWMQKIQDWNPKYFTLNYIPEKYRLMVTKFLRRVTIARLAELPDLAPAYHRKLRQAYETEDKLKNSDAVKQNIQHLNQLLDEVEAKLSESAYLGGEEFSMADVMLIPVLSRIVILKLEEYIKIRPNIAEYWLVVQERPSYKKVIGRYFKGWRKHKTLVKTWFFVHFRSLLKRLYDGPNLGVDDMNQKGQRQKN | 288 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 76981972 | 76984102 | - | Bma030282 | Bma01g02091 | 76608 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma01g02091 | 288 | CDD | GST_N_family | 1 | 73 | - | - | |
| Bma01g02091 | 288 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 120 | 252 | IPR010987 | - | |
| Bma01g02091 | 288 | SUPERFAMILY | Thioredoxin-like | 1 | 74 | IPR036249 | - | |
| Bma01g02091 | 288 | Gene3D | - | 138 | 239 | - | - | |
| Bma01g02091 | 288 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 80 | IPR004045 | - | |
| Bma01g02091 | 288 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 74 | IPR004045 | - | |
| Bma01g02091 | 288 | SFLD | Main (cytGST) | 1 | 232 | - | - | |
| Bma01g02091 | 288 | SFLD | Glutathione Transferase (cytosolic) | 1 | 232 | IPR040079 | - | |
| Bma01g02091 | 288 | Gene3D | Glutaredoxin | 1 | 75 | - | - | |
| Bma01g02091 | 288 | SUPERFAMILY | GST C-terminal domain-like | 139 | 242 | IPR036282 | - | |
| Bma01g02091 | 288 | Coils | Coil | 161 | 181 | - | - | |
| Bma01g02091 | 288 | PANTHER | GLUTATHIONE S-TRANSFERASE TCHQD | 1 | 267 | IPR044617 | GO:0004364 | |
| Bma01g02091 | 288 | Pfam | Glutathione S-transferase, C-terminal domain | 163 | 214 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g02091 | Bma-Chr1:76981972 | Bma05g00188 | Bma-Chr5:5233179 | 5.82E-13 | dispersed | |
| Bma01g02091 | Bma-Chr1:76981972 | Bma13g00049 | Bma-Chr13:650788 | 1.22E-13 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma01g02091 | K22077 | - | pvy:116140169 | 400.979 |