Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02124 | CTCTCTACTCTGATGGCGTTAGATTTCATCCCAGGGTTTCCCCCTAACATCGAAGGTCGGCAGATGGCTCTACAGGAAGCTGCCTCTCAAGGCATCAAAAGCATGGAGCGCCTCATCTACGTCCTGTCTCAGAAGCAGCAATCTACTCACTCGGACTGCGCCGATCTCACCGACGCTACCGTTTCGAAGTTCAAAAATGTCATTTCACTTCTCAACCGGACCGGTCATGCGCGGTTCAGGCGCGGTCCGACTTTCTCTCCCTCCTCCTCTTCCGCGTCTCTCTCCGTTCCTCACTTACAGACTTTGAACGTCACGCCGGCTACTTTTACTCCTCCGGTGACTGTCTCTACCGCTCCAATTGTTCCTCCGGCGAGCTTCGTTCAGCCTCAGCCGCAGAGGATGACCCTTGATTTCACGAAACCTAGTATTTTGAGCTCAAATGTTAAAAGTGCCGAGCTCGAGTTCACTAAGGAGAGCTTCAGCGTCTCGTCCAGCTGCTCGTTCATGTCGTCAAACATCACCGGAGATGGGAGCGTATCGAACGGAAAGCTCGGATCTTCGATCTTCCTGTCCACCGCACCAACAGTCTCCGCCGGGAAGCCGCCTCTCTCATCGGCGCTCTATAAGAAGAGGTGTCACTCCCACTCCCTCTCCCACTCCCACTCCCACTCCGAAAACGTGTCCGGTAAACTTTCCGGTTCAACTACCGCATCCGGCAAGTGCCACTGCTCCAAAAGAAGGAAGAATCGGGTAAAGAAAACAATCAGAGTGCCGGCGGTGAGTTCAAAGATAGCGGACATTCCGCCGGACGAGTACTCGTGGAGAAAATACGGGCAGAAGCCGATCAAAGGGTCACCGTACCCACGGGGATACTACAAGTGCAGTACAGTCAGAGGATGCCCCGCCAGGAAACACGTAGAGAGGGCCACGGATGATACGACGATGCTGATCGTAACGTACGAGGGGGAGCACCGTCATGCGCCGGGCGGGATGGAGGAGAACGCCGGCGTGTTGGTGTTAGAGTCAATGTGA | 1032 | 54.84 | LSTLMALDFIPGFPPNIEGRQMALQEAASQGIKSMERLIYVLSQKQQSTHSDCADLTDATVSKFKNVISLLNRTGHARFRRGPTFSPSSSSASLSVPHLQTLNVTPATFTPPVTVSTAPIVPPASFVQPQPQRMTLDFTKPSILSSNVKSAELEFTKESFSVSSSCSFMSSNITGDGSVSNGKLGSSIFLSTAPTVSAGKPPLSSALYKKRCHSHSLSHSHSHSENVSGKLSGSTTASGKCHCSKRRKNRVKKTIRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDTTMLIVTYEGEHRHAPGGMEENAGVLVLESM | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 77734156 | 77735793 | + | Bma002963.1 | Bma01g02124 | 76641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02124 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 17-RELATED | 20 | 334 | - | - | |
Bma01g02124 | 343 | Pfam | WRKY DNA -binding domain | 270 | 326 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma01g02124 | 343 | SMART | WRKY_cls | 268 | 328 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma01g02124 | 343 | Pfam | Plant zinc cluster domain | 209 | 266 | IPR018872 | - | |
Bma01g02124 | 343 | Gene3D | WRKY domain | 254 | 329 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma01g02124 | 343 | SUPERFAMILY | WRKY DNA-binding domain | 266 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma01g02124 | 343 | MobiDBLite | consensus disorder prediction | 217 | 247 | - | - | |
Bma01g02124 | 343 | MobiDBLite | consensus disorder prediction | 221 | 240 | - | - | |
Bma01g02124 | 343 | ProSiteProfiles | WRKY domain profile. | 263 | 329 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma01g02124 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 20 | 334 | IPR044810 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02124 | Bma-Chr1:77734156 | Bma04g00033 | Bma-Chr4:369663 | 3.59E-160 | dispersed | |
Bma01g02124 | Bma-Chr1:77734156 | Bma01g00400 | Bma-Chr1:3338515 | 1.12E-87 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56770 | PF03106 | WRKY | 2.60E-25 | CL0274 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02124 | - | - | bhj:120087087 | 417.927 |