Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02129 ATGGGGGGAGACAAGGCCATTAGTCTTGAAGAGATTAAGAACGAGTCTGTGGATCTGGAACGTATTCCAATTGAGGAGGTGTTTGAACAATTGAAATGTTCGAGAGAAGGTCTTTCATCGGAGGAAGGAGCCAATCGGCTTCATGTTTTTGGTCCAAACAAACTCGAAGAGAAGAAGGAGAGCAAAATTCTCAAGTTTTTGGGATTTATGTGGAATCCATTATCCTGGGTCATGGAAGCTGCTGCTTTAATGGCTATAGCACTGGCAAATGGAGGTGGAAGACCTCCTGACTGGCAGGACTTTGTAGGTATCATCATCTTGCTTGTCATCAACTCTACCATAAGTTTTATAGAAGAAAACAATGCTGGAAATGCGGCTGCTGCTCTTATGGCTGGTCTTGCTCCCAAAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGATGCTTCAATTCTAGTCCCAGGAGACATAATAAGCATTAAACTGGGAGATATTATTCCTGCTGATGCACGTCTTCTTGAGGGTGATCCCTTGAAAATTGACCAATCTGCTCTGACGGGAGAGTCCCTTCCTGTCACCAAGAACCCCTCGGATGAAGTTTTTTCAGGCTCAACATGTAAACAGGGAGAAATCGAAGCAGTTGTTATTGCCACTGGAGTGCACACCTTTTTTGGCAAAGCTGCTCACTTGGTGGACAACACCAATCAAGTTGGCCATTTCCAGAAAGTGCTAACTGCTATTGGTAATTTCTGCATATGCTCAATCGCCATTGGAATAGTTATTGAGATTATTGTCATGTATCCCATACAACATCGAGCGTACAGAGATGGCATTGACAATTTACTGGTGCTTTTGATTGGAGGAATTCCTATCGCTATGCCAACCGTTTTGTCTGTCACCATGGCTATTGGTTCTCACAGGCTTTCTCAGCAGGGTGCTATCACTAAGAGAATGACTGCTATTGAAGAAATGGCAGGTATGGATGTTCTTTGCAGTGACAAGACTGGAACCCTCACTTTGAACAAGCTGACTGTAGATAGAAGCTTGGTTGAAGTATTTGCTAAGGGTGTCGAAAAAGATTATGTCATTGTTCTAGCTGCAAGAGCTTCTCGTATTGAGAATCAAGATGCTATTGATGCTGCTATTGTTGGAACACTTGCAGATCCAAAAGAGGCACGAGTTGGTATTAGGGAAGTTCATTTCTTTCCGTTTAATCCCGTTGACAAGAGAACTGCTCTGACTTATATTGACTCTGATGGGAACTGGCATCGAGCTAGCAAAGGTGCCCCTGAGCAGATATTAACTCTTTGTAACGCAAAGGAAGATGTGAAGAAAAAGGTTCATTCAGTGATTGATAAGTTTGCTGAGCGTGGACTTCGATCTTTGGCTGTTGCAAGACAGGAAGTGCCTGAGAAATCAAAAGATAGTCCAGGTGGACCATGGCAGTTTGTTGGTTTATTGTCTTTATTTGATCCCCCCAGGCATGATAGTGCAGAAACCATCAGAAGAGCTCTAAACCTCGGAGTAAATGTCAAGATGATTACTGGAGATCAGCTAGCCATTGCCAAGGAGACTGGGAGAAGACTTGGAATGGGAACAAATATGTACCCTTCTTCTTCATTACTCGGTCAAGACAAGGATGCATCAATTGCTGCCCTACCCGTCGATGAATTGATTGAGAAAGCTGATGGGTTTGCTGGTGTTTTTCCAGAACACAAGTATGAAATTGTAAAGAGGTTACAAGAGAAAAAACACATATGTGGTATGACTGGAGATGGAGTCAATGATGCTCCCGCTCTAAAGAAGGCAGACATTGGAATTGCTGTTGCTGACGCTACTGATGCTGCAAGAAGTGCTTCAGACATTGTCCTGACTGAACCTGGATTGAGTGTGATTATTAGTGCCGTGTTGACTAGCAGAGCTATTTTTCAAAGGATGAAAAACTACACTATCTATGCAGTTTCGATCACCATTCGTATTGTGTTTGGCTTCATGTTCATTGCTTTGATTTGGAAGTTTGACTTTGCACCATTCATGGTTTTAATTATTGCCATTCTAAATGATGGAACAATCATGACAATTTCAAAGGATCGAGTTAAGCCATCACCACTGCCAGACAGCTGGAAGTTGAAAGAGATTTTTGCTACTGGCATCGTTCTGGGAGGTTACATGGCTCTCATGACAGTGATATTTTTTTGGGCTATGAGAGACACAGACTTCTTTTCAGATAAGTTTGGCGTGAAATCATTGAGGGAAAGCCCGGATGAAATGATGGCAGCCTTGTATCTGCAAGTGAGTATCGTCAGCCAGGCCCTTATTTTTGTTACCCGATCTCGCAGCTGGTCCTATGTTGAGAGACCTGGCCTTCTCTTAGTTGGTGCTTTCATAATTGCTCAGTTGGTGGCAACTGTAATATCAGTCTATGCAAATTGGGGATTTGCACGAATAAAGGGAACTGGGTGGGGGTGGGCTGGTGTTATCTGGCTTTATAGCGTGGTTACCTATGTTCCTCTCGATCTGCTTAAGTTTGCTATACGATACGTTCTAAGTGGGAAAGCTTGGAATAATCTTTTGGAGAATAAGACTGCCTTCACTACAAAGAAAGATTACGGCAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCACAGAGGACTCTACATGGTCTTCAAGCTCCTGAAAGCAACACCCTTTTCTCTGATAAAAATAGTTACAGAGAGCTTTCTGAGATCGCTGAGCAAGCCAAAAGACGCGCGGAGGTTGCAAGGCTCAGGGAGTTGCATACGCTGAAGGGTCATGTCGAATCAGTGGTGAAGCTCAAAGGATTGGACATCGACACTATTCAGCAACACTACACGGTTTAG 2865 43.49 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLSSEEGANRLHVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIIILLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAIGIVIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLVEVFAKGVEKDYVIVLAARASRIENQDAIDAAIVGTLADPKEARVGIREVHFFPFNPVDKRTALTYIDSDGNWHRASKGAPEQILTLCNAKEDVKKKVHSVIDKFAERGLRSLAVARQEVPEKSKDSPGGPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYMALMTVIFFWAMRDTDFFSDKFGVKSLRESPDEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVGAFIIAQLVATVISVYANWGFARIKGTGWGWAGVIWLYSVVTYVPLDLLKFAIRYVLSGKAWNNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQAPESNTLFSDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77782617 77788497 - Bma002970.1 Bma01g02129 76646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02129 954 SFLD p-type atpase 314 642 IPR044492 -
Bma01g02129 954 SUPERFAMILY HAD-like 328 638 IPR036412 -
Bma01g02129 954 Gene3D - 97 818 - -
Bma01g02129 954 Gene3D - 344 491 IPR023299 GO:0000166
Bma01g02129 954 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Bma01g02129 954 Gene3D - 903 954 - -
Bma01g02129 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 566 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 350 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 PRINTS H+-transporting ATPase (proton pump) signature 763 784 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma01g02129 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Bma01g02129 954 PANTHER PLASMA MEMBRANE ATPASE 6 934 - -
Bma01g02129 954 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Bma01g02129 954 Gene3D - 135 219 - -
Bma01g02129 954 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 809 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma01g02129 954 Pfam E1-E2 ATPase 134 311 - -
Bma01g02129 954 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Bma01g02129 954 PANTHER CALCIUM-TRANSPORTING ATPASE 6 934 - -
Bma01g02129 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 850 IPR023298 -
Bma01g02129 954 Coils Coil 905 925 - -
Bma01g02129 954 CDD P-type_ATPase_H 37 844 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma01g02129 954 SFLD C1.7: P-type atpase like 314 642 - -
Bma01g02129 954 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Bma01g02129 954 Gene3D - 329 628 IPR023214 -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Bma01g02129 954 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02129 Bma02g00051 CCT
Bma01g02129 Bma04g00037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01317 Bma-Chr1:18021017 Bma01g02129 Bma-Chr1:77782617 0 dispersed
Bma01g02129 Bma-Chr1:77782617 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma10g00662 Bma-Chr10:9527553 Bma01g02129 Bma-Chr1:77782617 0 dispersed
Bma01g02129 Bma-Chr1:77782617 Bma02g00051 Bma-Chr2:455665 0 wgd
Bma01g02129 Bma-Chr1:77782617 Bma04g00037 Bma-Chr4:382787 2.67E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02129 K01535 - zju:107420789 1714.12