Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02130 ATGCCAGGATTGAGTTGCAACTCCTGCAACAGGGAATTCATAGACGACGCGGAGCAAAAGCTCCATTACAAGTCCGAATGGCACCGCTATAATCTTAAGCGAAAGGTAGCTGGTGTTCCTGGTGTGACCGAAGCTTTATTTCTAGCTAGACAATCTGCAGTTTCACAGGAGAACACGAAGTCTAATGAAACCCCAATGTTGTACTCTTGTGGTCTCTGTGGAAAAGGATACAGGAGTTCCAAAGCTCATGCTCAGCATCTTAAATCAAGAAGTCATATAACACTAGCTTCTCAAGGATCCAATGAAGAAGATGAGAAGGCTGTAATCAAGCCACTTGTTCGTAGAACCTCAAATAAGATTCCCCAACAAAAAGGACATAATGAAGAAAGTGATGAGAGTGAAGATGAGTGGGAGGAGGTTGACCCAGATGAAGATTTGGTTAGTGAGGCCACACAGTCGATGACTGGTATGAAGATGAAAGATGTCAATGGTGAGATGGATGATGATATGGATGACAACGATGACATTGAGGAGTTGGATCCATCGTGCTGCTTTATGTGTGACCTGGACCATGACACTATTGAGAGTTGTATGGTTCACATGCACAAGCAGCATGGTTTCTTCATTCCCGATGTCGATTATTTGAAGGACCCAGCAGGCCTGCTTGGTTATCTTAGCCTGAAGGTGAAAAGGGATTTCATGTGCCTCTACTGCAATGATAGGTGTCTTCCTTTTAATAGCTTGGAAGCAGTTAGAAAGCACATGACAGCAAAAAGCCATTGCAAAGTGCACTATGGTGATGATGAGGATGAGGACGCAGATTTGGAAGACTTCTACGATTACAGTAGCAGTTATGTGGATGATAAAGGCAAAAAACTGGCAGTGGCTGGCGACTCGGCCAACTCTGTAGAACTTGGGAGTGGTGGGTCGGAGCTCATCATTACTAGAACATCTGATCGTGGAATCCTTACCAAAACACTTGGTTCCCGGGAGTTTTTGCGCTATTATCGTCAGAAACCACGCCCTGTGAATTACACACCTCTAACTGCTGCATTGGCTTCTAGGTACAGGAGCATGGGATTGGCAACAATACAATCAAGGGAAGGAATGGTGAGGATGAAAGTGATGAAAGCTATGAATAGATCAGGAGTGGAAGCCATGCGCAACAAGATTGGAATGAAGAGCAATGTGATCAGAAACCTGCCTAAGAATGTTCCTTATTGA 1224 44.36 MPGLSCNSCNREFIDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAVSQENTKSNETPMLYSCGLCGKGYRSSKAHAQHLKSRSHITLASQGSNEEDEKAVIKPLVRRTSNKIPQQKGHNEESDESEDEWEEVDPDEDLVSEATQSMTGMKMKDVNGEMDDDMDDNDDIEELDPSCCFMCDLDHDTIESCMVHMHKQHGFFIPDVDYLKDPAGLLGYLSLKVKRDFMCLYCNDRCLPFNSLEAVRKHMTAKSHCKVHYGDDEDEDADLEDFYDYSSSYVDDKGKKLAVAGDSANSVELGSGGSELIITRTSDRGILTKTLGSREFLRYYRQKPRPVNYTPLTAALASRYRSMGLATIQSREGMVRMKVMKAMNRSGVEAMRNKIGMKSNVIRNLPKNVPY 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77793198 77795676 + Bma002971.1 Bma01g02130 76647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02130 407 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 92 IPR013087 -
Bma01g02130 407 PANTHER ZINC FINGER PROTEIN-RELATED 1 407 - -
Bma01g02130 407 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Bma01g02130 407 PANTHER ZINC FINGER PROTEIN 622 1 407 IPR040025 -
Bma01g02130 407 SMART c2h2final6 68 92 IPR013087 -
Bma01g02130 407 SMART c2h2final6 233 260 IPR013087 -
Bma01g02130 407 SMART c2h2final6 4 28 IPR013087 -
Bma01g02130 407 Pfam C2H2 type zinc-finger (2 copies) 184 284 IPR041661 -
Bma01g02130 407 MobiDBLite consensus disorder prediction 112 144 - -
Bma01g02130 407 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Bma01g02130 407 SUPERFAMILY beta-beta-alpha zinc fingers 167 218 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02130 K14816 - zju:107420801 603.979