Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02149 ATGAAATTTTGGGATTTTTGGATAGGGAATCTGCAGTCTGATTGTAAAGAGGACCTTGTTGATCATACTGTTAAATTAAATGGCAAATGTTCAGTTGCTAGGAATGACTCTTGGAAGATTAAAGAAAAGAAGTGTGATGATACTCTCAAGGAAAATATCAAAAGTACAGTAAATTCATCTTGTCATTTGAAGGAGGAAGATGGGCATGGATATGAATTCGTCGTAGACAACAAGGATTTGCCTTCGAAGAAGTCACGAAGGAAATCTAGAAAAGGAAAATTTGTGCTAGAGGGTTATGGGGAGGGAGAAGTTTCTGCTGGTACTTCTACAAAGAAATGCAATTATTCCCGAGAAGACGAGGAAGAGAATCTCGAGGAGAATGCTGCAAGAATGCTATCTTCGCGTTTTGATCCGAGTTGTACGGGTTTTACAGTAAACAGCAAGCCCTTTGCAAATGGGCTGTCTGTTTTTGTGTCAAATGGACATGAGATTGTTAGTCAACATTCCAAGTCATCAAATGGAGTAGAATCTGAATCCGCCGATGGTTCAGGTAGAATATTGAGGCCAAGGAAAGTGGGCAAGGATAAGAAGCGCAGAAGAAAGAGGCGCCATTTTTATGAAGTTTTTTACAAGGACTCAGATGCATACTGGGTGTTGAACCGGAGAATTAAAGTGTTCTGGCCTTTGGACCAAAGTTGGTATTTTGGTTGCGTAAATGACTATAACAAAGAAATAAATCTCCATCATGTCAAGTACGATGACCGTGAGGAAGAATGGGTTGATCTCCGAAATGAGAGGTTTAAACTCTTGCTACTTCCTACAGAAGTTCATGGTAAGGGTTCAAGGAAGAAAACTACGACTGCAGATAAGATTTCTGATACTAGAACCGAAGGAATGCAGTACAGAAAATGTAAAGAAAGAAAAGATTTGACTATTAAGGATGAGGGCTGTGGTACTTATATGGATTCTGAGCCCATCATCTCTTGGTTGGCTCGATCTTCTCATCGTGTCAAATCTTCCTCTTCACATGTGTTAAAGAAACAGAAAACTTTTGATCCAGGATCAAAGTTGTCTGAGAAAGCTTTAAATGTACATGAATATTCAAATGAACATTCCTTAGGAAGTTATAAAAACCATTTTTTATGTAAATCTGATTTTCTAGAAAGAGTAGGATCATTAGCTGAGGGGGAAAGGTCAGGAATGTCTGCTTCAGGAAGCACGAGCTGCTCAAAAGAAGGTCAGCAGTCTATTGTATATTTTAGAAGAAAGTTTCGGAAGACAAGCATTGAACTATCACATTTATATGAGTTATGGATGTTGAACATGCGAAAGAGAACTGGTTATTCCTTGGGAAGATCTGATCCCAATGGAAAGTTGAGGTGCACTGATGATGAAGGGTTTTTGGCACTTCCATTGATAGAATCAGAGCAGTTTAAATTTGAGTTAAGCCTACTTGGGTTTTCATTCCTGTTAGACTCTATTAAAGTAGAAAATAATCAATGGTTTCATGCATTGATGCTCCTTCAGTATGGTACATTGATGACTATGTGGCCAATTGTTAGTTTAAAGATGCTATTCGTTGATAATGTGGTGGGGTTGAGGTTTCTCTTATTTGATGGTTGTCTTAGACAGGCTGTTGCTTTGGTTTTTCTTGTATTAACAATGTTCAATTCGACTGAAAAACAGTATGCAGCTTCGCAGTTGCCTCTAACTTCTATCGAGCTCAAAATTTCTTGTATTCAAGGTATCAACAAGCACCTAGATTTCTTGTTCAGCAACTTTTCAGAAATAACGAATTCCAAGTGGATTCACCTAGACAATAGTCTTAAGAGATGTTGTTTGATGACCAAGCAGATTCCTTTGGCTGCATTTGCCAATATCAGTCACTCTTCTCTTTATTATGACAAAATGAACAAAAGCTTCCCTCCATTTTCTCTTTCTTTCACCGCTGCTCCAACTTTCTTTCTTGGTGTGCACTCACCATTATGGGAAAGGTACCAACAGCAGTTGAAAGACTGGGAACTATCCATCACCAAAAACTGTACTGGCATGCGCAATGGATTTCAGGAGAAGCCTTCGTCAACTGAGAAACCCCCCATGTTTGCATTCTGTTTAAAACCTCGAGGATTAGATGTCCCCAATAAAGGTTCAAAGCAGAGGTCTCATAGGAAGTTTTCTATGGGCAGCCACAGTAATGCTATCCCAGGAGACCATGATACTTTTCATGGTTTTGGACGGAGACTAAATGGGTTTGGTTTGGCAGATGAAACGATTGCATACTCAGACTATAACCATGAAGTATTGGATGATTCTCCATTGTTTCAAACATCGCCTAGGTTATTTTCCCTTCAAGATGCAGGGAGCATGGGATATACCTCAATGAGCTATGACGAGTTTGATAGAAATACTCCTGCAATTCACAGGACCAAAACCAAGAAATATGGCCAGTTTCTATCTTGTAACGACCCAGAAACGATGACTTTGTACAATCAGAGAACAATTAATAAAAGAAACGGAGTTGATTGGCACAGGAATTTTCCTGCATGGAAAAGCCAGCGTCAATACCAAGCGGGCATCCACAGGCACTACATCCAGCAGTTGGATCCTTCTGATCTGGACGAGTTTAGGCTACGAGATGCATCCGGCGCTGCTAAGGATGCCAATAACACGGCCAAGCACAAGCGAGAAAGGGCCAAACGAATGCTCCTCAGAGCCGATCTAGCAATTCACAAGGCTGTGGTAGCTCTCATGACGGCCGAAGCAATCAAGACAAACAGTGGTGCTGAATAG 2790 40.32 MKFWDFWIGNLQSDCKEDLVDHTVKLNGKCSVARNDSWKIKEKKCDDTLKENIKSTVNSSCHLKEEDGHGYEFVVDNKDLPSKKSRRKSRKGKFVLEGYGEGEVSAGTSTKKCNYSREDEEENLEENAARMLSSRFDPSCTGFTVNSKPFANGLSVFVSNGHEIVSQHSKSSNGVESESADGSGRILRPRKVGKDKKRRRKRRHFYEVFYKDSDAYWVLNRRIKVFWPLDQSWYFGCVNDYNKEINLHHVKYDDREEEWVDLRNERFKLLLLPTEVHGKGSRKKTTTADKISDTRTEGMQYRKCKERKDLTIKDEGCGTYMDSEPIISWLARSSHRVKSSSSHVLKKQKTFDPGSKLSEKALNVHEYSNEHSLGSYKNHFLCKSDFLERVGSLAEGERSGMSASGSTSCSKEGQQSIVYFRRKFRKTSIELSHLYELWMLNMRKRTGYSLGRSDPNGKLRCTDDEGFLALPLIESEQFKFELSLLGFSFLLDSIKVENNQWFHALMLLQYGTLMTMWPIVSLKMLFVDNVVGLRFLLFDGCLRQAVALVFLVLTMFNSTEKQYAASQLPLTSIELKISCIQGINKHLDFLFSNFSEITNSKWIHLDNSLKRCCLMTKQIPLAAFANISHSSLYYDKMNKSFPPFSLSFTAAPTFFLGVHSPLWERYQQQLKDWELSITKNCTGMRNGFQEKPSSTEKPPMFAFCLKPRGLDVPNKGSKQRSHRKFSMGSHSNAIPGDHDTFHGFGRRLNGFGLADETIAYSDYNHEVLDDSPLFQTSPRLFSLQDAGSMGYTSMSYDEFDRNTPAIHRTKTKKYGQFLSCNDPETMTLYNQRTINKRNGVDWHRNFPAWKSQRQYQAGIHRHYIQQLDPSDLDEFRLRDASGAAKDANNTAKHKRERAKRMLLRADLAIHKAVVALMTAEAIKTNSGAE 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77984813 77992143 - Bma002991.1 Bma01g02149 76666

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02149 929 Gene3D - 219 266 - -
Bma01g02149 929 PANTHER OS01G0179500 PROTEIN 661 926 - -
Bma01g02149 929 PANTHER OS01G0179500 PROTEIN 87 630 - -
Bma01g02149 929 PANTHER PHD FINGER PROTEINS 661 926 - -
Bma01g02149 929 PANTHER PHD FINGER PROTEINS 87 630 - -
Bma01g02149 929 MobiDBLite consensus disorder prediction 167 198 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02149 - - - zju:107421307 513.842
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma01g02149 Bma04g00052 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02149 Bma-Chr1:77984813 Bma04g00052 Bma-Chr4:495484 3.38E-138 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g379 Blo01g01361 . Bda01g00721 Bda03g00052 . . Bma04g00052 Bma01g02149 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00336 . . . . . . Bpe04g00039 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cme04g00376
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004344 2 3 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 2 1 43