Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02150 ATGGTTGGTGGAAGCAGGAGAGACGAGGGGTCATTGATGTTGAACAACACCAATGTTTTTGCAGCGCTCGAATCTCTGAGGAAGAAGAAGAAGTCAGATAAGGAGCGGAAGAGCAAAGGGTCATCTAAGTCACAAGCGGCTCAGGCCAAGGAGCCAGAGCCACAGTTATTCTGGGCACCAGCTCCATTGAATTCGAAATCATGGGAAAGTGAGAGCGAGGAAGATATCCTTGACGAAGGGGATGAAGATATAGAAGAGGAACATGATGTAGTCAATGAACCTGAGGTCCCAGTACATCAAGAGCCAATAGCGAAAAAGCCTCCTGAGGCATCTGCAGCGCCAAAGGAGGCTGAGAGACAGCTTTCCAAAAAGGAAAGAAAGAAGAAGGAACTTGCAGAACTTGATGCGCTCCTGGCTGATTTTAAAGTAAATCAAAATGAGAGCAGCAATCAAAATGAGTCAAACATCGTGGAAGAGAAGAGAGACTCTGACAGTGCAAATGGGGAAAAGAAGGAAAGTGTTCCTGCAGAGGTCTTAAGCGACCCTCAGAAAAAGGCAATTTATGATCAGTATGGTGAAGAAGGGTTGAAAGACATGCCACCGCCTGGCAGCGGTGGATTCCCGTTTGGAAGTGGAGGCGGGGGTGGGTCAAGTGGATTCAACCCTAGAAATGCAGAGGATATCTTTGCTGAATTTTTCGGAAGTAGCCCTTTTGGCTTTGGTTCTTCAGGCGCTGGAAGGTCTATGAGATTCCAGTCAGATGGAGGAACTTTTGGGGGATTCGGAGGCGAAAAAATTTTCAGAACATACAGCGAGAGCGTTGTGCCGAAAAAACCCCCACCCGTGGAGAGCAAATTGCCTTGCAGTCTGGAGGAGCTGTATTCTGGGTCAACAAGGAAAATGAAGATATCAAGGACCATTGTTGATGCCAATGGACGTCAAGTGCCGGAAACGGAGATATTGACAATCGAAGTGAAGCCGGGTTGGAAGAAAGGCACGAAGATCACTTTCCCGGATAAAGGGAATGAACAGCCCAACCAACTTCCGGCAGACTTGGTGTTTGTAATTGACGAGAAGCCTCACAAGGATTTCCAGAGAGACAGTAACGATCTGACTATGAATTACAAGGTTTCATTAGCAGAAGCTCTTGGTGGGACCACCGTAAAACTCACAACGTTGGACGGTCGTGATCTGTCGATCCCTGTGACGGACATTGTGAGCCCGGGCTACGAGCTCGTGATTGCAAGAGAAGGAATGCCGATAGTGAAAGAACCCGGAAACAGGGGTGACCTCAGGATCAAATTTGAGGTGAGTTTCCCCTCAAGATTGTCTGCCGACCAACGTGCAGGCCTGAAGCGCGCGCTAGGGGGTTGA 1374 48.47 MVGGSRRDEGSLMLNNTNVFAALESLRKKKKSDKERKSKGSSKSQAAQAKEPEPQLFWAPAPLNSKSWESESEEDILDEGDEDIEEEHDVVNEPEVPVHQEPIAKKPPEASAAPKEAERQLSKKERKKKELAELDALLADFKVNQNESSNQNESNIVEEKRDSDSANGEKKESVPAEVLSDPQKKAIYDQYGEEGLKDMPPPGSGGFPFGSGGGGGSSGFNPRNAEDIFAEFFGSSPFGFGSSGAGRSMRFQSDGGTFGGFGGEKIFRTYSESVVPKKPPPVESKLPCSLEELYSGSTRKMKISRTIVDANGRQVPETEILTIEVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHKDFQRDSNDLTMNYKVSLAEALGGTTVKLTTLDGRDLSIPVTDIVSPGYELVIAREGMPIVKEPGNRGDLRIKFEVSFPSRLSADQRAGLKRALGG 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77993668 78003217 + Bma002992.1 Bma01g02150 76667

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02150 457 MobiDBLite consensus disorder prediction 25 128 - -
Bma01g02150 457 Coils Coil 117 144 - -
Bma01g02150 457 Pfam DnaJ C terminal domain 282 440 IPR002939 -
Bma01g02150 457 Gene3D - 360 456 - -
Bma01g02150 457 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 175 457 - -
Bma01g02150 457 SUPERFAMILY HSP40/DnaJ peptide-binding domain 281 362 IPR008971 GO:0006457|GO:0051082
Bma01g02150 457 CDD DnaJ_C 280 443 - -
Bma01g02150 457 Gene3D - 281 359 - -
Bma01g02150 457 MobiDBLite consensus disorder prediction 140 221 - -
Bma01g02150 457 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 175 457 - -
Bma01g02150 457 SUPERFAMILY HSP40/DnaJ peptide-binding domain 364 449 IPR008971 GO:0006457|GO:0051082
Bma01g02150 457 Gene3D DnaJ domain 158 244 IPR036869 -
Bma01g02150 457 SUPERFAMILY Chaperone J-domain 177 195 IPR036869 -
Bma01g02150 457 MobiDBLite consensus disorder prediction 111 128 - -
Bma01g02150 457 MobiDBLite consensus disorder prediction 72 90 - -
Bma01g02150 457 MobiDBLite consensus disorder prediction 25 41 - -
Bma01g02150 457 MobiDBLite consensus disorder prediction 154 178 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02150 K09510 DNAJB4; DnaJ homolog subfamily B member 4 - csv:101204033 437.958
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02150 Bma-Chr1:77993668 Bma02g01314 Bma-Chr2:55280645 5.99E-108 dispersed
Bma01g02150 Bma-Chr1:77993668 Bma04g00054 Bma-Chr4:506966 1.02E-49 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g373 Blo01g01363 . Bda01g00723 . . . . Bma01g02150 . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1734 . . . . Chy04g00340 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007809 1 1 1 1 1 1 2 1 1 1 1 1 2 0 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 1 36