Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02152 ATGAATAAAGAGCATACTACTGCCAAAGTTGAAGAATCTATTGTCCGAGTCACACGTGCAAGGACTAAAGCATTAAGCACCTTAGCCGGGAACGCTCACTCCTCCAAACCTCATTTGAAGGGTCCAATGAATGTCTCCCAAGCGAAGTTTAAAAGAGCAACACCTGACGAGAGTAAAATTTCTGCACCTGCCACCACTGTTATTCAGCGTAAGAGGAGGGCCATCTTGAGGGATGTAACTAACACTTTTTGTGAAAGTTCACATACTACCTGCATCAATACTTCAAAAATAAAAATTAACAAGTCGACTGTTAGAGGTCCTGCAAAATTTGATGCAAAGGTGCCATTGGATGTCTCTATAAATGTTCCTAAAGCGCCAGATGATCCAAAGACAAAATTAGCTGAAGATTTATCCAAAATAAGGATGGCAGAAATGGAAGAAATTCCCTTGTTGGCAAGGAATGAAGAAGAAGGAAATATTTTGCAAAATACTTACCCATGCATCAAATGTGGCTTCGGTGATATGGCATTTCCTATATCTTTCCTATCAGGATATAGTGACACTGTCTTGATTAAATTTGCAGAAGAATATTTTCCTTGCAAAAATATGGAATCTTCTAATCATATTTGCATCGTGGACATTGATTCAAGCTCAAAGGATCCCCAAGATTGCAGTATATACGCCTCTGACATATACAAGATGATAAGTGTAACCGAGCTTGACCACAGACCATCAACTAATTATATGGAACAATTGCAACGAGATATCACTGTGAACATGAGAGGAATTTTAATCGATTGGCTTGTTGAGGTATCTGAAGAATATAAGTTGGTTCTTGATACACTACATCTCACTTCAAATATCATTGATCGATTTCTCTCTAAAAGTTATATTGAAAAACAAAAATTGCAGCTCCTTGGAGTTACTTGCTTGCTAATTGCCTCAAAATATGAAGAGATCTGTTCACCGCGGGTGGAAGAATTCTGTTTCATTACTGACAATACTTACACAAAAGAACAGGTTTTAGAGATGGAGAGTGAAGTCTTGAACTTAATCCACTTTCAGCTATCAGTTCCTACTGCAAAAACATTTCTTAGGAGATTTATTCAAGTTGCACAGACTGGTTCCAAGGTTCCTTGTGTGGAATTAGAGTATTTGGCTGACTATTTAGCGGAGTTGACTCTTGTTGACTACAACTTCTTAAAGTTCCTGCCTTCTTTGATAGCTGCATCTGCGGTATTCCTTGCCAAATGGACACTTAACCAATCAAATCATCCATGGAGTCCAATTCTAGTGCATTATACCACATACAACACTTCCGAGCTGAAAACTACAGTACTCGCCTTGGAAAATTTACAACTCAACACTGATGGTTCCTCCTTAAATGCTATTCGTGAGAAGTACGGACAACAAAAGGTTCGGATGACTTGA 1431 38.5 MNKEHTTAKVEESIVRVTRARTKALSTLAGNAHSSKPHLKGPMNVSQAKFKRATPDESKISAPATTVIQRKRRAILRDVTNTFCESSHTTCINTSKIKINKSTVRGPAKFDAKVPLDVSINVPKAPDDPKTKLAEDLSKIRMAEMEEIPLLARNEEEGNILQNTYPCIKCGFGDMAFPISFLSGYSDTVLIKFAEEYFPCKNMESSNHICIVDIDSSSKDPQDCSIYASDIYKMISVTELDHRPSTNYMEQLQRDITVNMRGILIDWLVEVSEEYKLVLDTLHLTSNIIDRFLSKSYIEKQKLQLLGVTCLLIASKYEEICSPRVEEFCFITDNTYTKEQVLEMESEVLNLIHFQLSVPTAKTFLRRFIQVAQTGSKVPCVELEYLADYLAELTLVDYNFLKFLPSLIAASAVFLAKWTLNQSNHPWSPILVHYTTYNTSELKTTVLALENLQLNTDGSSLNAIREKYGQQKVRMT 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78043311 78047325 - Bma002995.1 Bma01g02152 76669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02152 476 Gene3D - 244 357 - -
Bma01g02152 476 SUPERFAMILY Cyclin-like 358 472 IPR036915 -
Bma01g02152 476 CDD CYCLIN 260 349 IPR013763 -
Bma01g02152 476 Pfam Cyclin, N-terminal domain 230 356 IPR006671 -
Bma01g02152 476 Gene3D - 230 473 - -
Bma01g02152 476 CDD CYCLIN 357 449 IPR013763 -
Bma01g02152 476 Pfam Cyclin, C-terminal domain 359 473 IPR004367 -
Bma01g02152 476 PANTHER CYCLINS 50 473 IPR039361 -
Bma01g02152 476 PANTHER CYCLIN-A2-4 50 473 - -
Bma01g02152 476 SUPERFAMILY Cyclin-like 219 356 IPR036915 -
Bma01g02152 476 SMART cyclin_7 266 350 IPR013763 -
Bma01g02152 476 SMART cyclin_7 363 451 IPR013763 -
Bma01g02152 476 SMART Cyclin_C_2 359 476 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02152 Bma-Chr1:78043311 Bma02g00209 Bma-Chr2:2255994 2.64E-92 dispersed
Bma01g02152 Bma-Chr1:78043311 Bma01g00805 Bma-Chr1:7537800 1.62E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02152 K06627 - pvy:116133096 517.694