Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02155 ATGTCTGGATCAGCAATGGTGGGAGATGCGAGCTCGTGGTCCCGCGCGCTCGTCAAGATCTCTCCTTATACCTTCTCTGCTGTGGGAATTGCCGTCGCTATCGGCGTTTCCGTTCTCGGCGCCGCCTGGGGGATTTATATAACTGGAAGTAGTTTGATTGGGGCCGCGATCAAAGCTCCGCGTATTACTTCGAAGAATTTAATCAGTGTAATTTTTTGCGAAGCAGTGGCCATATATGGTGTTATTGTGGCCATCATCTTACAAACAAAGTTAGAGAGTGTTCCATCATCACAATTGTATGCCCCGGAGTCTCTTAGGGCAGGATATGCGATTTTTGCCTCTGGACTTATTGTGGGCTTTGCAAACCTTGTCTGCGGATTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTATCTGATGCCCAAAACTCATCTCTTTTTGTGAAGATTCTAGTTATTGAGATCTTTGGTAGTGCCCTTGGGTTATTTGGTGTGATTGTAGGAATCATAATGTCAGCTCAAGCTTCTTTTCCAGCAAGGGTTCCGTGA 549 46.08 MSGSAMVGDASSWSRALVKISPYTFSAVGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSQLYAPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASFPARVP 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78151121 78152551 + Bma002999.1 Bma01g02155 76672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02155 182 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 4 178 - -
Bma01g02155 182 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Bma01g02155 182 Gene3D - 23 177 IPR035921 -
Bma01g02155 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 67 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g02155 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 123 149 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g02155 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 41 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g02155 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 150 173 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bma01g02155 182 CDD ATP-synt_Vo_c_ATP6F_rpt2 107 171 - -
Bma01g02155 182 Pfam ATP synthase subunit C 112 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bma01g02155 182 Pfam ATP synthase subunit C 29 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bma01g02155 182 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 178 - -
Bma01g02155 182 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Bma01g02155 182 SUPERFAMILY F1F0 ATP synthase subunit C 104 172 IPR035921 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02155 Bma04g00059 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00735 Bma-Chr1:6732366 Bma01g02155 Bma-Chr1:78151121 6.80E-23 dispersed
Bma01g02155 Bma-Chr1:78151121 Bma05g00418 Bma-Chr5:13219011 5.06E-23 dispersed
Bma01g02155 Bma-Chr1:78151121 Bma01g02159 Bma-Chr1:78370643 3.83E-124 proximal
Bma01g02155 Bma-Chr1:78151121 Bma04g00059 Bma-Chr4:546526 4.68E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02155 K03661 - rcu:8284846 315.849