Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02182 | ATGCTCATCTCTCTCTTCTCTATCTGTCTAATCCTTTCATCCATTGCTATTTCTTCTTCCCTTCTTTGCTTTCCTTCCTGTAGGTTAATTTTTTGGGATCTACTCCATTTCTGTAAGAAGATTATTTTTTTCGCGTCTTCAGCCGTAGCTACCGAATATTATATATTTCTTATCCTTATTTTGATCGGAGGAAGTAGAACTGGCCAATTAGTAATAACCACTAACATGGGCTATCTGAATTCAGTCCTATCATGTTCGAGTCAGGTTCATTCTGCCGATGAAGGACCAGTAAGCGGCGGTGGTCTCAGTTCAAATGGAAAGTTCAGCTATGGATATGCAAGTTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGTGTTGAAGGGGAAATAGTAGGCCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCGCGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCCGATACTAAATCAGCTATAGCCGATGCATACATCCACACAGACTCAGAATTTCTAAAATCAGAAAACAATCAGAACAGGGATGCTGGATCAACAGCTTCTACTGCTATTTTAGTCGGTGATCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCTGTTATATGTCGTGGTGGAAATGCAATTGCTGTCTCCCGAGATCACAAACCTGATCAATCAGATGAACGACAACGGATTGAGGATGCTGGAGGATTCGTGGTGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGGGATAGGCTGTTGAAGCAATATGTTGTAGCTGATCCGGAAATTCAGGAGGAAAAGATCGATAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCTAACGAGGAGGCTGTTGCGATGATAAAACCAATTCAGGCACCGGAGGAGGCCGCAAAGAGGTTGATGCAGGAAGCATACCAGAAAGGCAGTGCTGATAACATTACCTGTGTGGTGGTTCGTTTTTTGGCCAATCAAGGCGCTTCCTCCTGCCAAACGTCTGCGTAA | 1107 | 43.9 | MLISLFSICLILSSIAISSSLLCFPSCRLIFWDLLHFCKKIIFFASSAVATEYYIFLILILIGGSRTGQLVITTNMGYLNSVLSCSSQVHSADEGPVSGGGLSSNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYIHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVVWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIQAPEEAAKRLMQEAYQKGSADNITCVVVRFLANQGASSCQTSA | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 78713791 | 78718235 | + | Bma003028.1 | Bma01g02182 | 76699 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02182 | 368 | Gene3D | - | 101 | 360 | IPR036457 | - | |
Bma01g02182 | 368 | PANTHER | ALPHABET, ISOFORM E-RELATED | 78 | 363 | - | - | |
Bma01g02182 | 368 | SUPERFAMILY | PP2C-like | 104 | 355 | IPR036457 | - | |
Bma01g02182 | 368 | PANTHER | PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C | 78 | 363 | - | - | |
Bma01g02182 | 368 | SMART | PP2C_SIG_2 | 120 | 355 | IPR001932 | - | |
Bma01g02182 | 368 | ProSiteProfiles | PPM-type phosphatase domain profile. | 109 | 355 | IPR001932 | - | |
Bma01g02182 | 368 | CDD | PP2Cc | 108 | 355 | IPR001932 | - | |
Bma01g02182 | 368 | Pfam | Protein phosphatase 2C | 138 | 348 | IPR001932 | - | |
Bma01g02182 | 368 | SMART | PP2C_4 | 99 | 353 | IPR001932 | - | |
Bma01g02182 | 368 | ProSitePatterns | PPM-type phosphatase domain signature. | 140 | 148 | IPR000222 | GO:0043169 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g02182 | Bma04g00107 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00627 | Bma-Chr1:5679783 | Bma01g02182 | Bma-Chr1:78713791 | 3.70E-25 | dispersed | |
Bma01g02182 | Bma-Chr1:78713791 | Bma11g00807 | Bma-Chr11:24502658 | 1.06E-71 | dispersed | |
Bma04g00794 | Bma-Chr4:9035602 | Bma01g02182 | Bma-Chr1:78713791 | 2.29E-20 | dispersed | |
Bma14g01907 | Bma-Chr14:40766803 | Bma01g02182 | Bma-Chr1:78713791 | 1.05E-29 | dispersed | |
Bma02g00324 | Bma-Chr2:4405883 | Bma01g02182 | Bma-Chr1:78713791 | 5.07E-51 | transposed | |
Bma03g00241 | Bma-Chr3:1838588 | Bma01g02182 | Bma-Chr1:78713791 | 6.90E-33 | transposed | |
Bma09g00623 | Bma-Chr9:43564674 | Bma01g02182 | Bma-Chr1:78713791 | 1.84E-27 | transposed | |
Bma14g01999 | Bma-Chr14:43298404 | Bma01g02182 | Bma-Chr1:78713791 | 3.83E-106 | transposed | |
Bma01g02182 | Bma-Chr1:78713791 | Bma04g00107 | Bma-Chr4:839888 | 3.33E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02182 | K17506 | - | gmx:547661 | 542.732 |