Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02188 ATGGAATTACGTTTGTTGAATGGTGATTCAGGAGCTAGTTCGCCGACGTTAATGGCAGCGTCGAAGAAACTTTTGACGAAAGGAATCTCAGAGGCGGAAGCAGCGGACGTGGAGTTCGCCGAGTGCGATTGCTGCGGGCTGAGGGAGGAGTGCACGCTGCCGTACATAGCCGGAGTGCGGGAGAGGTATCAAGGGCGGTGGATTTGCGGACTGTGTGCGGAAGCAGTGAAGGACGAATCTCTCCGATCCACGAGAAACATCACCACCGACGAAGCAATCAATCGCCACACCAAGTTCTGCGCGAAATTCAGATCCTCCTCTCCTCCAACAAACTCAACGGAGGAACTCATATCGGCAATGAAGCAGCTGCTCCGGAGAACACTGGACTCTCCGAGAAAGGAGGCCTCTCCTTCGGCATGCCCAGGGCGAGGGATGATCAAGATTTAG 447 54.59 MELRLLNGDSGASSPTLMAASKKLLTKGISEAEAADVEFAECDCCGLREECTLPYIAGVRERYQGRWICGLCAEAVKDESLRSTRNITTDEAINRHTKFCAKFRSSSPPTNSTEELISAMKQLLRRTLDSPRKEASPSACPGRGMIKI 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78787522 78787968 + Bma003035.1 Bma01g02188 76705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02188 148 MobiDBLite consensus disorder prediction 128 148 - -
Bma01g02188 148 Pfam Protein of unknown function (DUF1677) 37 126 IPR012876 -
Bma01g02188 148 PANTHER OS01G0745000 PROTEIN 21 141 IPR012876 -
Bma01g02188 148 PANTHER DUF1677 FAMILY PROTEIN 21 141 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02188 Bma01g00906 CCT
Bma01g02188 Bma01g00906 ECH
Bma01g00906 Bma01g02188 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02188 Bma-Chr1:78787522 Bma13g01208 Bma-Chr13:45343678 2.02E-45 dispersed
Bma01g02188 Bma-Chr1:78787522 Bma10g00722 Bma-Chr10:11368646 7.19E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02188 - - ming:122087472 164.851