Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02206 ATGGAAGAGGGAGTGGAGAGGGATGCGGAGATGGAATCGGAAATGGATGATCCGGTAGATGAGAATGGAGGGGAGGAGGTTCTCGGCTCTAGTTTGACGATGGAGAAGGTCGCAGCAGCCAAGAAATTCATAGAGAATCACTATAGGGCTCAGATGAAGAACATTCGAGAGCGGAAAGAGAGGCGATGGGTGTTAGAGAGTAAATTAGCTTCCTCAGCTGTGCCTAAGGAGGAGCAAATGCACCTTATCAAAGATTTAGAGCGAAAAGAAACAGAGTTTATTCGACTTAAAAGGCACAAGATTTGTGTGGACGATTTTGAGCTCTTAACCATAATTGGCAGAGGAGCATATGGCGAAGTGCGACTGTGTCGGGAGAAAAAATCTGGCAATATATATGCCATGAAAAAACTGAAAAAATCTGAAATGCTCATGAGAGGACAGGTGGAACATGTAAGAGCAGAAAGAAATTTGCTAGCAGAAGTTGCCAGCCATTGCATAGTTAAACTTTACTACTCATTTCAAGATGCTGAGTTCTTATACTTAATCATGGAATATCTACCAGGTGGTGACATGATGACTCTTCTGATGAGGGAAGATATATTAACTGAAAGTATTGCTAAATTTTACATTGCTCAAAGTGTCCTTGCAATAGAATCTATTCACAGACACAACTACATTCACAGAGATATAAAACCTGACAACCTTCTTCTGGACAAAAATGGTCACATGAAGCTCTCAGATTTTGGTCTCTGTAAGCCCCTTGATTCTTCAACATTGTCTGCTCTGCATGAAAATGGAACAATGGATGATGAAAATTTGGCAGAGCCAATGGATGTCGATGGTTGTGTTTCTGCTGACAACCAGAGTAGTTGGAAGAGCCCACTTGAACAACTTCATCGTTGGCAGATGAACAGAAGAAAGCTGGCATTTTCAACCGTGGGAACCCCTGATTATATTGCTCCTGAAGTACTATTGAAGAAAGGATATGGAATGGAGTGTGACTGGTGGTCTCTAGGTGCAATAATGTATGAAATGCTGGTTGGTTATCCACCATTTTATTCGGATGATCCAATCACCACATGTAGAAAGATTGTTCATTGGAAAACCCAGCTAAAGTTTCCGGATGACGCCAAGTTGACACCTGAGGCAAAGGATCTCATATGTCAGTTGCTATGTGATGTTGATCATAGACTAGGCGTCGCAGGGGCACACCAAATAAAAGCGCATCCGTGGTTCAAAGATGTTTTGTGGGATAAACTTTATGAAATGGACGCTGCCTTCAAACCAGAAGTAAACGGAGAGCTTGATACCCAGAATTTCATGAAGTTTGATGAATTGGATCCTCCAACACAAGCAAGATCTGGTTCGGGACCATCTAGAAAGCTGCTCTTGACGCCCAAAGATCTCAGCTTCGTTGGGTATACATACAAGAACTTTGATGCTGTTAGGGGAAATCGCCAGTCATATGGTAAGACTTGTTAG 1482 42.31 MEEGVERDAEMESEMDDPVDENGGEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIRERKERRWVLESKLASSAVPKEEQMHLIKDLERKETEFIRLKRHKICVDDFELLTIIGRGAYGEVRLCREKKSGNIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEFLYLIMEYLPGGDMMTLLMREDILTESIAKFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDSSTLSALHENGTMDDENLAEPMDVDGCVSADNQSSWKSPLEQLHRWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKTQLKFPDDAKLTPEAKDLICQLLCDVDHRLGVAGAHQIKAHPWFKDVLWDKLYEMDAAFKPEVNGELDTQNFMKFDELDPPTQARSGSGPSRKLLLTPKDLSFVGYTYKNFDAVRGNRQSYGKTC 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78977697 78982318 - Bma003051.1 Bma01g02206 76723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02206 493 Pfam Protein kinase domain 303 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02206 493 Pfam Protein kinase domain 107 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02206 493 SMART serkin_6 106 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02206 493 CDD STKc_NDR_like 104 477 - -
Bma01g02206 493 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 26 489 - -
Bma01g02206 493 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma01g02206 493 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bma01g02206 493 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 489 - -
Bma01g02206 493 SUPERFAMILY Protein kinase-like (PK-like) 90 457 IPR011009 -
Bma01g02206 493 Gene3D Transferase(Phosphotransferase) domain 1 190 259 - -
Bma01g02206 493 Gene3D Transferase(Phosphotransferase) domain 1 311 432 - -
Bma01g02206 493 MobiDBLite consensus disorder prediction 1 28 - -
Bma01g02206 493 MobiDBLite consensus disorder prediction 1 23 - -
Bma01g02206 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Bma01g02206 493 ProSiteProfiles Protein kinase domain profile. 106 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02206 493 SMART pkinase_C_6 413 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma01g02206 493 Gene3D Phosphorylase Kinase; domain 1 70 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02206 Bma-Chr1:78977697 Bma07g00553 Bma-Chr7:7524914 0 dispersed
Bma01g02206 Bma-Chr1:78977697 Bma09g00765 Bma-Chr9:46175670 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66298 PF00069 Pkinase 1.60E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02206 K08790 - zju:107420106 862.448