Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02217 ATGTCAAGAGCGCCTTCTCTTTCCGAGCTTAGCCTTCTCATCCTTTGTTCTGCGCTATTCGTTTCCACGCTCTCCTTTGTTGCTCTCTCGCTCCCTGAATTTGCTGACTTATTTCTCTCCAATTCCACTTTGGACTCCAACAATGCATCTCTCTCCAGGAACAAGGAAGGTAGCTTCGCAGACATCATTGATCGTGCTCTCCAGAATGAATTCAAAGAGAGTGACCAGAATGAAGCTACCGATGCTGGAAGTTTCAATAACAGTATCACGGAACAGCAGGCAGTTTTAGAAACTGTAGCCAGGGTGAAGCCAAAGAAAAATGACACAAAGGAGGAAAAGCCATTTCAACTTCATCACGTCTTCAATCTGGATAATGATAATAGAGCAGAAGATACCCCAACATTGATAGATCGAAGAGACAATGTATTTATTATATCAAACTTCAAATCCAAATATCCAATACTCCAGTTGGACTTACGATTAATCTCAGATCTGGTTGTTGTTATTGTGTCTGCAACTTGTGGCGGCATTGCTTTTGCTTGTTCAGGACAGCCAGTTATTACTGGATATCTACTGGCTGGATCTGTTATTGGACCTGGCGGATTTAACTTCATCAGTGAAATGGTGCAAGTAGAAACTGTGGCCCAGTTTGGTGTAATTTTTCTTCTTTTTGCATTGGGCCTTGAGTTCTCTACAGCGAAGCTTCGAGTTGTTAGAGCCGTTGCTGTTTTAGGAGGACTCCTTCAAATCGTCCTATTTATGTGCCTCTGCGGAGTCATTGCTACGTTATGTGGTGGAAAGGGTTCGGATGGAGTATTTGTCGGCGCATTCCTTTCCATGTCTTCAACAGCAGTGGTGTTGAAGTTTTTGATGGAGAAGAATGCAACTAATGCTCTTCATGGCCAAGTCACCATTGGCACGCTTATCCTGCAGGATTGTGCTGTTGGCTTGCTGTTTGCTTTGCTTCCTGTTCTCGGTGGAACTTCTGGTGTTCTCCAAGGAGTTTTATCCATGTCTAAAGTGTTGGTGGTGTTGATAGCGTTTTTGGCTGTTTTAACATTGTTGTCTCGTACTTGTGTTCCTTGGTTACTTAAATTGATGATAAGTCTATCATCCGAGACTAATGAACTCTATCAATTAGCATCAGTTGCGTTCTGCTTGCTTGTAGCTTGGTGTAGCGATAAGCTGGGATTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCCACAACTGATCTTGCTCAACATACATTAGAACAAGTTGAACCCATCCGGAACTTCTTTGCTGCCCTTTTCCTGGCCAGCATTGGGATGCTGATCCATGTTCATTTTCTCTGGAGCCATGTTGATATATTACTAGCATCTGTTATTTTGGTCATCATTGTGAAATCTGTAATAATTAGCTCAGTGGTGAAGGCATTTGGTTACAACCACAAGACATCACTTCTTGTCGGGTTGTCTTTGGCTCAAATCGGAGAATTCGCCTTTGTACTTCTTAGTCGAGCTTCTAATCTCCATCTAGTTGAGGGGAAATTATATTTGCTACTCATTGGGACTACCACTCTAAGCCTGGTATCGACTCCTTTGTTATTCAAGCTGATTCCTGCTGTAGTGCATATGGGTATTCTCTTACGTTGGCTCTCACATGATACCTCTGTAGAGATTGGATTTAAAGGAGATAACCTCCGCCCAGAGGGTGGCAAGCAGCGTGTCATGGTGATCGTCCAAGGATCACACGATTTATGA 1755 43.02 MSRAPSLSELSLLILCSALFVSTLSFVALSLPEFADLFLSNSTLDSNNASLSRNKEGSFADIIDRALQNEFKESDQNEATDAGSFNNSITEQQAVLETVARVKPKKNDTKEEKPFQLHHVFNLDNDNRAEDTPTLIDRRDNVFIISNFKSKYPILQLDLRLISDLVVVIVSATCGGIAFACSGQPVITGYLLAGSVIGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQIVLFMCLCGVIATLCGGKGSDGVFVGAFLSMSSTAVVLKFLMEKNATNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVLSMSKVLVVLIAFLAVLTLLSRTCVPWLLKLMISLSSETNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWSHVDILLASVILVIIVKSVIISSVVKAFGYNHKTSLLVGLSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTTLSLVSTPLLFKLIPAVVHMGILLRWLSHDTSVEIGFKGDNLRPEGGKQRVMVIVQGSHDL 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79130188 79147204 + Bma003067.1 Bma01g02217 76734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02217 584 Pfam Sodium/hydrogen exchanger family 166 534 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma01g02217 584 Gene3D - 159 543 IPR038770 -
Bma01g02217 584 PANTHER K(+) EFFLUX ANTIPORTER 6 18 583 - -
Bma01g02217 584 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 583 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00926 Bma-Chr1:9049957 Bma01g02217 Bma-Chr1:79130188 0 dispersed
Bma01g02217 Bma-Chr1:79130188 Bma07g00532 Bma-Chr7:7027793 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02217 - - csv:101217282 880.167