Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02228 ATGGCGCCCTCGTTCGATTGGTGGACGAAGGAGAGCCATAGAGGAACCCCTGTCGTCGTTAAGATGGAAAATCCGAACTGGTCCATGGTAGAACTCGAAGGGCCATCGGAAGATGACTTTCTCATAACCGAATCTCCGGTCGGAATCCGTGATAAAGGTCGAGGTAAGAACGCTAAGCAGCTCACTTGGGTTCTTCTCCTCAAAGCGCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCCGCATTGGTCGGACTCGCCACCGCCGTTAAACGCCGCGTCGCTTCGGGTAGAACTGACGCCGACAACGACAACGACATTGGTTGTAGCAGGGAGAAAGAGAACCCTACATTGAAAACCAGGTTTTATTCTTGCATCAAAATTTTTCTTCTTCTGTCGGTGCTTCTTCTAGGGTTTGAGGTTGCTGCCTACTTCAAAGGTTGGCATTTTAGCACTCCCCATCTTCAATTGAGTTATTTGTGGGCAACTCCTTTTGGGGTAAAAGGAACTTTCGACTGGATTTATTCTCAATGGGTCTTATTTCGGGTGGATTATCTTGCTCCTCCTCTCCAGTTCTTAGCCAATGCTTGCATTATCCTCTTCCTCATTCAGAGTTTAGACAGGCTAATTTTGTGTATGGGTTGTTTCTGGATTCGATTCAAGAAAATAAAACCAGCTCCGAAAGAAGCCCCCACCGACGACATTGAATCCGGCGAGAAGGGCTATTTTCCCATGGTTCTTGTTCAGATCCCGATGTGCAACGAAAAAGAGGTTTATCAACAATCAATTGCTGCAGTTTGCAATTTAGACTGGCCAAAATCAAAGCTTCTTATTCAGGTTCTCGACGATTCAGATGACCCAATCACTCAAGTGCTGATCAAAGAAGAGGTCCAAAAATGGCAGCAAGAAGGGGCCAACATTTTGTATAGGCATAGGGTAATTAGAGATGGGTACAAGGCTGGTAATCTCAAGTCTGCAATGAACTGTAGCTACGTTAAAGATTATGAATTCGTTGCCATTTTCGATGCTGATTTTCAGCCAACCCCTGATTTCCTTAAAAGAACAGTCCCTCATTTCCAGGATAATGAAGAACTGGGTCTGGTTCAAGCAAGGTGGTCTTTTGTGAACAAGGATGAGAACTTGCTTACAAGGCTGCAGAATATCAATTTAGCATTCCACTTCGAGGTGGAGCAGCAAGTTAATGGCGTTTTCCTTAATTTCTTCGGGTTCAATGGGACAGCAGGAGTATGGAGGATTAAGGCTCTGGAAGATTCTGGTGGGTGGTTGGAGAGAACCACCGTCGAGGACATGGATATTGCCGTCCGAGCTCATCTTCACGGATGGAAATTCATCTTCCTCAACGATGTAGAGTGCCAGTGTGAATTGCCGGAATCTTATGAAGCTTACCGGAAACAACAACATCGATGGCATTCTGGCCCGATGCAATTGTTTCGCCTTTGCTTACCGGCGATAATCCGATCCAAGGTATGTTTATACATCAAATATCGATGTATTAACTATTTCTTCCTTCAAATGTTCGTGTTATGA 1548 45.28 MAPSFDWWTKESHRGTPVVVKMENPNWSMVELEGPSEDDFLITESPVGIRDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVGLATAVKRRVASGRTDADNDNDIGCSREKENPTLKTRFYSCIKIFLLLSVLLLGFEVAAYFKGWHFSTPHLQLSYLWATPFGVKGTFDWIYSQWVLFRVDYLAPPLQFLANACIILFLIQSLDRLILCMGCFWIRFKKIKPAPKEAPTDDIESGEKGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPITQVLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFQDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKVCLYIKYRCINYFFLQMFVL 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79288701 79290495 + Bma003077.1 Bma01g02228 76745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02228 515 Pfam Glycosyl transferase family group 2 338 507 IPR001173 -
Bma01g02228 515 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 512 IPR029044 -
Bma01g02228 515 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 5 510 - -
Bma01g02228 515 PANTHER - 5 510 - -
Bma01g02228 515 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 461 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02228 Bma-Chr1:79288701 Bma01g02238 Bma-Chr1:79515244 0 dispersed
Bma01g02228 Bma-Chr1:79288701 Bma09g00585 Bma-Chr9:42932507 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02228 - - zju:107420618 913.294