Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02238 ATGGCGCCCTCGTTCGATTGGTGGACGAAGGAGAGCCATAGAGGAACCCCTGTCGTCGTTAAGATGGAAAATCCGAACTGGTCCATGGTAGAACTCGAAGGGCCATCGGAAGATGACTTTCTCATAACCGAATCTCCGGTCGGAATCCGTGATAAAGGTCGAGGTAAGAACGCTAAGCAGCTCACTTGGGTTCTTCTCCTCAAAGCGCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCCGCATTGGTCGGACTCGCCACCGCCGTTAAACGCCGCGTCGCTTCGGGTAGAACTGACGCCGACAACGACAACGACATTGGTGGAAGCAGGGAGAAAGAGAACCCTACTTTAAAAACCAGGTTTTATTCCTGCATCAAAGTTTTCCTTCTTCTGTCGGTGCTTCTTCTAGGGTTCGAGTTCGCTGCCTACTTCAAAGGTTGGCATTTTAGCACTCCCCAACTTCAATTGAGCTATTTGTGGGCAACCCCATTTGGGGTAAAAGGAACTTTCGACTGGATTTATTCTCAATGGGTATTGATTCGGGTGGCTTATTTCGCTCCTCCTCTCCAATTCTTAGCCAACGCTTGCATTATCCTCTTCCTCGTTCAGAGTTTAGACAGGCTAGTTCTGTGTATGGGTTGTTTCTGGATTCGATTCAAGAAGATCAAACCAGTCCCTAGAGAAGCCGCCACCGACGATGTTGAATCCGGCGAGAATGGTTATTTTCCGATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAACAATCAATTGCTGCAGTTTGCAATTTAGACTGGCCAAAATTGAAGCTGCTGATTCAGGTTCTCGACGATTCCGACGACCCAACGACTCAACTGCTGATCAAAGAAGAGGTTCAAAAATGGCAGCATGAAGGTGCCAACATTGTGTATAGGCATAGGGTGATTAGAGATGGATACAAGGCTGGTAATCTCAAGTCTGCTATGAACTGTAACTACGTTAGAGACTATGAATTCGTTGCCATTTTCGATGCCGATTTTCAACCCACCTCTGATTTCCTTAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTGGGTCTTGTTCAAGCCAGGTGGTCTTTTGTGAACAAGGATGAGAACTTGCTTACGAGGCTGCAGAACATCAATTTAGCATTCCATTTTGAGGTGGAGCAGCAAGTTAATGGCATTTTTCTTAATTTCTTCGGCTTCAATGGGACGGCCGGAGTGTGGAGGATTAAGGCTCTTGAAGATTCCGGTGGGTGGTTGGAGAGAACCACGGTAGAGGACATGGATATTGCCGTCCGAGCTCATCTTCATGGATGGAAATTCATTTTCCTCAACGATGTAGAGTGCCAGTGTGAATTGCCGGAATCTTATGAAGCTTACCGGAAACAACAACATCGATGGCATTCTGGCCCGATGCAATTGTTTCGCCTTTGCTTACCGGCGATAATCCGATCCAAGATAAGCGTGTGGAAGAAATTTAATATGATCTTTCTATTTTTTCTTCTGAGGAAACTGATTCTACCATTCTATTCCTTCACTCTCTTCTGCATAATTCTTCCAATGACCATGTTTGTTCCAGAGGCGGAGCTGCCAGCTTGGGTTGTCTGCTATATTCCAGCAACAATGTCGTTTCTCAACATTCTTCCGGCGCCAAAGTCCTTCCCTTTCATCGTTCCTTATCTCCTTTTCGAGAACACCATGTCTGTGACTAAGTTCAATGCGATGATCTCCGGTTTGTTTCAGCTGGGCAGTGCTTACGAATGGGTGGTTACTAAGAAATCCGGCAGGTCGTCAGAGGGAGATCTTGTTTCCTTGATCGAGAAAGAACCGACTCATCAAAGAGGGTCGTCGGCTCCTAATCTGGACGAATTGCAGGAAGAGATTCAAAAGCAGGAGGAGAAAGCGTTGCTGAAGAAGAAGAAGAAGAAGAAGAAGCACAATAGAATATACAGGAAGGAGCTGGCTTTGGCTTTTCTTCTTCTAACAGCCTCTGCCCGGAGCCTCCTCTCGGCTCAGGGAATCCACTTCTACTTCTTGCTGTTTCAAGGCATCTCTTTCCTTCTTGTCGGTTTGGATCTCATCGGAGAGCAGGTTGATTGA 2127 46.31 MAPSFDWWTKESHRGTPVVVKMENPNWSMVELEGPSEDDFLITESPVGIRDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVGLATAVKRRVASGRTDADNDNDIGGSREKENPTLKTRFYSCIKVFLLLSVLLLGFEFAAYFKGWHFSTPQLQLSYLWATPFGVKGTFDWIYSQWVLIRVAYFAPPLQFLANACIILFLVQSLDRLVLCMGCFWIRFKKIKPVPREAATDDVESGENGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKLKLLIQVLDDSDDPTTQLLIKEEVQKWQHEGANIVYRHRVIRDGYKAGNLKSAMNCNYVRDYEFVAIFDADFQPTSDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKEPTHQRGSSAPNLDELQEEIQKQEEKALLKKKKKKKKHNRIYRKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79515244 79517718 + Bma003092.1 Bma01g02238 76755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02238 708 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 461 IPR029044 -
Bma01g02238 708 Coils Coil 630 650 - -
Bma01g02238 708 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 707 - -
Bma01g02238 708 PANTHER - 6 707 - -
Bma01g02238 708 Pfam Glycosyl transferase family group 2 338 533 IPR001173 -
Bma01g02238 708 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 523 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02238 Bma01g00959 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02228 Bma-Chr1:79288701 Bma01g02238 Bma-Chr1:79515244 0 dispersed
Bma01g02238 Bma-Chr1:79515244 Bma04g00358 Bma-Chr4:2891941 0 dispersed
Bma01g02238 Bma-Chr1:79515244 Bma09g00585 Bma-Chr9:42932507 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02238 - - zju:107420618 1230.31