Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02255 ATGACCGATCAATTCCGACTAGACGATTCGAAGGATGGGGACGGAGCGGAAGAGGCAAATAGTCTTTTGAAGCCCAAATCAGGGTCGCCCCCGTCGTTGTTGTTGTCTCCTTCTTTGGAAGACGATGACGAGGAAGCAGCCTTCGAAGCAAGAGAGAAGATCATGGTTGTAGATTTAGACTCAGACGACGGCGGCGATTCGACTATTGTACCTCCTTTCTCGTGGAAGAAGCTCTGGTTGTTTACAGGCCCGGGGTTTTTGATGAGCATAGCGTTCTTAGATCCGGGGAATTTGGAAGGGGATCTCCAGGCCGGAGCTATTGCAGGCTACTCATTGCTTTGGTTATTGATGTGGGCGACGGCCATGGGGCTGCTGATCCAGCTCTTATCGGCCAGAGTCGGCGTCGCTACTGGTCGGCACTTGGCCGAGCTGTGCAGGGAAGAGTATCCAAACTGGGCTAGATTAGTTTTGTGGTGCATGGCCGAGCTGGCCTTGATTGGCGCTGACATTCAGGAGGTCATCGGAAGTGCGATTGCTATCCAAATTCTCAGCAATGGACTTCTGCCTCTTTGGGCTGGCGTTATCATTACCGCATCCGATTGTTTCTTGTTTTTATTTCTCGAGAATTATGGCGTTCGGAAGTTAGAAGCTGTTTTTGCCGTCCTGATCGCAACCATGGCCGTATCCTTCGCGTGGATGTTCGGTGACACTAATCCAAACCGGAAAGAACTTTTAATGGGTATTCTAATTCCAAGACTTAGCTCAAAGACAATTCGACAAGCTGTTGGGGTCGTCGGCTGTGTCATAATGCCCCATAACGTATTCTTGCATTCCGCTTTAGTACAATCAAGGAATGTCGATCCGAATAAAAAAGGGCGAGTGCAAGAAGCCCTAAACTACTACTCTATCGAGTCATCAATCGCCCTTCTCATCTCTTTCATGATCAATTTGTTTGTCACCACAGTGTTTGCCAAGGGATTTTACGGGTCTCCACAGGCCAGTAATATTGGGCTCGTAAATGCCGGGCAGTATCTCGAGCAGAAATACGGCGGAGGGCTATTTCCAATACTTTACATTTGGGGTATTGGCTTGTTGGCTGCGGGACAGAGTAGCACCATCACCGGAACATATGCCGGACAGTTTATAATGGGTGGTTTTCTTAACCTCCGGTTGAAGAAATGGTTGAGAGCATTGATTACGCGCAGTTTTGCAATTGTTCCGACGATGGTTGTAGCTCTCGTGTTCAATACGTCAGAAGCTTCGTTAGATGTTTTGAATGAATGGCTTAATGTTCTTCAGTCCATACAAATTCCCTTTGCTCTCATTCCTCTTCTTACCTTGGTGTCCAGAGAGCAGATCATGGGGGTTTTCAAAATTGGTCCTGTTCTTGAGAGGGTAGCGTGGACGGTCGCCGCATTGGTGATAATAATCAACGGATATCTACTATTAGATTTCATCCTTTCTGAAGTTAGAGGATTTCTTTTCGGCTTCATGGTCTGCTCAGCCACAGTTGCATATGTATCCTTTATCTTCTATCTCATTTCCTACGGCGGGACTCTTCCATCTACCTGCTTCCATTCCCTGGTAAAGACATTGAGAATCGGCCGGAGCGGGGTCTGA 1620 47.72 MTDQFRLDDSKDGDGAEEANSLLKPKSGSPPSLLLSPSLEDDDEEAAFEAREKIMVVDLDSDDGGDSTIVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARVGVATGRHLAELCREEYPNWARLVLWCMAELALIGADIQEVIGSAIAIQILSNGLLPLWAGVIITASDCFLFLFLENYGVRKLEAVFAVLIATMAVSFAWMFGDTNPNRKELLMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRNVDPNKKGRVQEALNYYSIESSIALLISFMINLFVTTVFAKGFYGSPQASNIGLVNAGQYLEQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTMVVALVFNTSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSREQIMGVFKIGPVLERVAWTVAALVIIINGYLLLDFILSEVRGFLFGFMVCSATVAYVSFIFYLISYGGTLPSTCFHSLVKTLRIGRSGV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79740480 79742656 - Bma003110.1 Bma01g02255 76772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02255 539 MobiDBLite consensus disorder prediction 1 19 - -
Bma01g02255 539 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 76 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PANTHER BNAC08G04640D PROTEIN 37 527 - -
Bma01g02255 539 MobiDBLite consensus disorder prediction 1 43 - -
Bma01g02255 539 Pfam Natural resistance-associated macrophage protein 99 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 37 527 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 368 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 430 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 396 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 157 183 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 187 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 261 284 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 PRINTS Natural resistance-associated macrophage protein signature 212 233 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma01g02255 539 Hamap Divalent metal cation transporter MntH [mntH]. 61 486 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02255 Bma-Chr1:79740480 Bma03g01128 Bma-Chr3:14874165 0 dispersed
Bma01g02255 Bma-Chr1:79740480 Bma06g00366 Bma-Chr6:9116207 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02255 K21398 - mnt:21393551 845.884