Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02257 ATGGCTGAAAACTCTGTGCGCCTCACTCGCGGCGCGAAGAAGAGAGAGGCAGCATCGGTGTTAGTTGAAGAACGATCGGTTAAGAGGAAGCGTGTGGTGTTAGGAGAGCTTCCCAATCTGCAGAATGCTAATGTATCAGTAGGTCTAAAGCCTTCTTCAGAACCAGAGAAGCAGAAATGTTTGGGCAAGACTAAGGTGAAAAGTTCGAGAATAGCTATAAAAAATAAATCCAAAGCAACGAAGGATAGCTGTTTGAAATTGGAAAATGATCCTGATTCGGACGACCCCCAAATGTGTGCGCCTTATGCTACAGATATTTATGACTATCTTCACAAAATGGAGATGGAACCAAAAAGAAGACCACTCTCAAATTATCTTGAGAAAATTCAGAAAGATATCACGGCTAATATGAGAGGAGTATTGGTAGATTGGTTAGTGGAAGTGGCCGAAGAGTACAAACTCTGTTCAGATACTCTTTATCTCTCCATCTCCTATATGGATAGATTCTTATCTTTGCACACTCTTAATAGACAGAGGCTTCAACTTCTTGGTGTTTCATCCGTGCTCATAGCTTCTAAATACGAAGAGATCAGTCCTCCACATGTAGAAGAATTGTGCTATATCACAGACAACACTTATACAAAAGAAGAGGTGGTGAAAATGGAGGCTGATATACTCAAATCTTTGAACTTTGAAATTGGAAATCCTACAACAAAGACTTTCGTAAGGTATGAATGTCAAACATGCGCTTAA 753 40.24 MAENSVRLTRGAKKREAASVLVEERSVKRKRVVLGELPNLQNANVSVGLKPSSEPEKQKCLGKTKVKSSRIAIKNKSKATKDSCLKLENDPDSDDPQMCAPYATDIYDYLHKMEMEPKRRPLSNYLEKIQKDITANMRGVLVDWLVEVAEEYKLCSDTLYLSISYMDRFLSLHTLNRQRLQLLGVSSVLIASKYEEISPPHVEELCYITDNTYTKEEVVKMEADILKSLNFEIGNPTTKTFVRYECQTCA 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79747472 79748625 + Bma003112.1 Bma01g02257 76774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02257 250 CDD CYCLIN 137 226 IPR013763 -
Bma01g02257 250 ProSitePatterns Cyclins signature. 138 169 IPR006671 -
Bma01g02257 250 SUPERFAMILY Cyclin-like 94 233 IPR036915 -
Bma01g02257 250 Gene3D - 119 234 - -
Bma01g02257 250 SMART cyclin_7 143 227 IPR013763 -
Bma01g02257 250 Gene3D - 105 245 - -
Bma01g02257 250 Pfam Cyclin, N-terminal domain 105 233 IPR006671 -
Bma01g02257 250 PANTHER CYCLINS 22 244 IPR039361 -
Bma01g02257 250 PANTHER CYCLIN-A3-1-RELATED 22 244 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02257 Bma05g00047 CCT
Bma01g02257 Bma05g00047 ECH
Bma01g02257 Bma04g00147 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02257 Bma-Chr1:79747472 Bma02g00209 Bma-Chr2:2255994 4.50E-56 dispersed
Bma01g02257 Bma-Chr1:79747472 Bma04g00147 Bma-Chr4:1283818 9.48E-84 wgd
Bma01g02257 Bma-Chr1:79747472 Bma05g00047 Bma-Chr5:2323966 1.22E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02257 K06627 - cpap:110818790 322.783