Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02257 | ATGGCTGAAAACTCTGTGCGCCTCACTCGCGGCGCGAAGAAGAGAGAGGCAGCATCGGTGTTAGTTGAAGAACGATCGGTTAAGAGGAAGCGTGTGGTGTTAGGAGAGCTTCCCAATCTGCAGAATGCTAATGTATCAGTAGGTCTAAAGCCTTCTTCAGAACCAGAGAAGCAGAAATGTTTGGGCAAGACTAAGGTGAAAAGTTCGAGAATAGCTATAAAAAATAAATCCAAAGCAACGAAGGATAGCTGTTTGAAATTGGAAAATGATCCTGATTCGGACGACCCCCAAATGTGTGCGCCTTATGCTACAGATATTTATGACTATCTTCACAAAATGGAGATGGAACCAAAAAGAAGACCACTCTCAAATTATCTTGAGAAAATTCAGAAAGATATCACGGCTAATATGAGAGGAGTATTGGTAGATTGGTTAGTGGAAGTGGCCGAAGAGTACAAACTCTGTTCAGATACTCTTTATCTCTCCATCTCCTATATGGATAGATTCTTATCTTTGCACACTCTTAATAGACAGAGGCTTCAACTTCTTGGTGTTTCATCCGTGCTCATAGCTTCTAAATACGAAGAGATCAGTCCTCCACATGTAGAAGAATTGTGCTATATCACAGACAACACTTATACAAAAGAAGAGGTGGTGAAAATGGAGGCTGATATACTCAAATCTTTGAACTTTGAAATTGGAAATCCTACAACAAAGACTTTCGTAAGGTATGAATGTCAAACATGCGCTTAA | 753 | 40.24 | MAENSVRLTRGAKKREAASVLVEERSVKRKRVVLGELPNLQNANVSVGLKPSSEPEKQKCLGKTKVKSSRIAIKNKSKATKDSCLKLENDPDSDDPQMCAPYATDIYDYLHKMEMEPKRRPLSNYLEKIQKDITANMRGVLVDWLVEVAEEYKLCSDTLYLSISYMDRFLSLHTLNRQRLQLLGVSSVLIASKYEEISPPHVEELCYITDNTYTKEEVVKMEADILKSLNFEIGNPTTKTFVRYECQTCA | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 79747472 | 79748625 | + | Bma003112.1 | Bma01g02257 | 76774 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02257 | 250 | CDD | CYCLIN | 137 | 226 | IPR013763 | - | |
Bma01g02257 | 250 | ProSitePatterns | Cyclins signature. | 138 | 169 | IPR006671 | - | |
Bma01g02257 | 250 | SUPERFAMILY | Cyclin-like | 94 | 233 | IPR036915 | - | |
Bma01g02257 | 250 | Gene3D | - | 119 | 234 | - | - | |
Bma01g02257 | 250 | SMART | cyclin_7 | 143 | 227 | IPR013763 | - | |
Bma01g02257 | 250 | Gene3D | - | 105 | 245 | - | - | |
Bma01g02257 | 250 | Pfam | Cyclin, N-terminal domain | 105 | 233 | IPR006671 | - | |
Bma01g02257 | 250 | PANTHER | CYCLINS | 22 | 244 | IPR039361 | - | |
Bma01g02257 | 250 | PANTHER | CYCLIN-A3-1-RELATED | 22 | 244 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g02257 | Bma05g00047 | CCT | |
Bma01g02257 | Bma05g00047 | ECH | |
Bma01g02257 | Bma04g00147 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02257 | Bma-Chr1:79747472 | Bma02g00209 | Bma-Chr2:2255994 | 4.50E-56 | dispersed | |
Bma01g02257 | Bma-Chr1:79747472 | Bma04g00147 | Bma-Chr4:1283818 | 9.48E-84 | wgd | |
Bma01g02257 | Bma-Chr1:79747472 | Bma05g00047 | Bma-Chr5:2323966 | 1.22E-60 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02257 | K06627 | - | cpap:110818790 | 322.783 |