Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02274 ATGAACTTCAAGAACTTTGGGTATGATCCGCCGACTGAAAACGGCTATTCAAGTGGTGGAAGAGCACAGGGGAGTTTTCCATTGACGAGACAATCATCAATCTATTCTCTGACTTTTGATGAGTTGCAGAACACCTTGGGAGCGTCAGGGAAGGACTTTGGCTCCATGAATATGGATGAGCTCTTGAAGAATATTTGGAGCGCTGAAGAAATGCAAACCATGGCTTCGTGTAGCACCACAGCTGCACAGCAAGTTTGTGCTAATTCCAGTGTGCATTTACAAAGGCAGGGCTCCTTAACATTGCCCCGAACGCTCAGCCAGAAGACGGTGGATGAGGTTTGGAGGGATTTATCAAATGTAGATGATTTAGGTAAAGGTGGAAATGGTGGTATTTTATCTATGCCACGGAGACAGCCAACTTTGGGGGAGATGACTCTAGAGGAGTTCTTGTTTAAAGCTGGTGTTGTGAGGGAAGACAACCAGTTTCTAGGAAAGCCTAATAATGGAGGATTTTTTGGTTATACAAATGGTTTAGGAATTGACTTCCAGCAGCCAGATTCGAACACAGGATTAGTAGGTAATAGAATTTTAGATAATACTAGTCAAATACCAATCCAGTCATCAAATTTGCCTTTGAATGTTGATGGGGTTAGATCTAATCACCAACAACAACAGAAGATTTTCCCCAAACAACCCACTGTAACATATGGACAACTGCCTTTATCAAGTAGTTCTCAGTTGGAAGATCTAGAAATGAAAGAAGGAAGTTCAGGATATGCAGATAATCGTTTAAATTCAAATGTAAACCAAAGATCTGTCCTGCAAAGTGGACGTATGGGAGTGATTGGTTTAAAAGGCGAGCATGTTAATGTTGCAACAGTGTCACCAGGGAACCAAGTTTCATCAGATGGAATTGGGAAGAGTAATGGCGATATCTCTTCCATTTCATCTGCGCCTTACATGTTTAATGGTGGACTAAGAGGGAGGAGGTCAAATGGAACAGTGGAGAAGGCTGCTGAGAGGAGACAGAAAAGAATGATTAAGAACAGAGAATCTGCAGCAAGATCCCGAGCTCGCAAGCAGGCTTATACAACGGAACTGGAAGCTGAAGTTGCAAGTCTAAAAGAGGAGAATGAAAAATTGCAGAAGAAACAGGTACTTACTAGCTTTCCTACAGCCAGATTTCATTTTCTACGATCACTTGTGAATGGATAA 1215 42.06 MNFKNFGYDPPTENGYSSGGRAQGSFPLTRQSSIYSLTFDELQNTLGASGKDFGSMNMDELLKNIWSAEEMQTMASCSTTAAQQVCANSSVHLQRQGSLTLPRTLSQKTVDEVWRDLSNVDDLGKGGNGGILSMPRRQPTLGEMTLEEFLFKAGVVREDNQFLGKPNNGGFFGYTNGLGIDFQQPDSNTGLVGNRILDNTSQIPIQSSNLPLNVDGVRSNHQQQQKIFPKQPTVTYGQLPLSSSSQLEDLEMKEGSSGYADNRLNSNVNQRSVLQSGRMGVIGLKGEHVNVATVSPGNQVSSDGIGKSNGDISSISSAPYMFNGGLRGRRSNGTVEKAAERRQKRMIKNRESAARSRARKQAYTTELEAEVASLKEENEKLQKKQVLTSFPTARFHFLRSLVNG 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79881660 79883212 - Bma003131.1 Bma01g02274 76791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02274 404 CDD bZIP_plant_BZIP46 341 393 - -
Bma01g02274 404 Gene3D - 339 390 - -
Bma01g02274 404 SMART brlzneu 337 393 IPR004827 GO:0003700|GO:0006355
Bma01g02274 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 344 359 IPR004827 GO:0003700|GO:0006355
Bma01g02274 404 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 13 385 IPR043452 GO:0003700|GO:0045893
Bma01g02274 404 SUPERFAMILY Leucine zipper domain 341 384 IPR046347 GO:0003700|GO:0006355
Bma01g02274 404 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 13 385 - -
Bma01g02274 404 Pfam bZIP transcription factor 339 384 IPR004827 GO:0003700|GO:0006355
Bma01g02274 404 Coils Coil 364 384 - -
Bma01g02274 404 MobiDBLite consensus disorder prediction 1 23 - -
Bma01g02274 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 384 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02274 Bma04g00163 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02274 Bma-Chr1:79881660 Bma03g00516 Bma-Chr3:4008581 1.69E-76 dispersed
Bma01g02233 Bma-Chr1:79375887 Bma01g02274 Bma-Chr1:79881660 0 transposed
Bma04g00576 Bma-Chr4:5277647 Bma01g02274 Bma-Chr1:79881660 1.64E-39 transposed
Bma05g01395 Bma-Chr5:53358736 Bma01g02274 Bma-Chr1:79881660 4.93E-07 transposed
Bma01g02274 Bma-Chr1:79881660 Bma04g00163 Bma-Chr4:1410423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56789 PF00170 bZIP_1 7.40E-13 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02274 K14432 - csin:114258286 428.328