Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02310 ATGCAGTTTCTTCTTCAGCTGCTTTTTTTTCTCACAATCATAATTCTCTTCAAATTTTGCTACTCAACCCTATGGCTCCCTCTCAGGATACATTTCCACTTCCGGAAACAGGGCATAAGAGGCCCTCCCTTCCGTCCATTTTTGGGCAACGCCCTCGAGCTCCGCCTTTCCTTCGCCGAAGCTCTGGCGAAGACTATTCCTTTTAACCACGACGTACTTCCTCTCGCGATTCCGTTTTACCATCGGTGGTCCACCGCGTACGGCAAACGTTTCTTGCACTGGTTCGGGTCCGTTCCGCAACTGGCACTGACCGACCCGGATTCGTTGAAGGAGATTTTCATGAAAACCGGCAAATCGTTTCTGAAGGTGAAGTTCAACCCACTGGCGAAAAGCCTATTCGCTGATGGGATCAGTCAGCTTGAAGGTGATAAATGGGTCTTACATAGAAGAATCGTGACCCAGGCCTTCACGTTAGATCGCGTAAAGGGATGGGTGCCTGAATTCGTTGCCAGTGCTACAACAATGGCGGAAAAATGGGAAGCATTGAATGAAGGGAGGGATGAGTTTGAAATAGAGGTTCACAAAGAATTCCACAATCTATCAGCAGATATAATATCAAGAACAGCCTTCGGGAGTAGCTTTGAAGAAGGCAAAGACATCTTCGATCTGCAAGAGCAGCAGATGCAGCTCTTCTTTGATAACTTTGCTGTCTTGGGTCAAAAAATCAGATTTCTGCCTACCCAGATGAACAGAAAGAGGTGGAGATTAGAGAGAGAAGTGCGGAAATCGATACGAAGACTTATCGAAATGAACGACCAGACGAGTGGGAATTCAACAAATCTGCTTAGTTTGTTGACATCTTCGTATAGAAATCAGAACGGGGAAGAAGAGAGGCTGACGATGGATGAGATTATAGACGAATGCAAGGCATTTTACTTCGCCGGAAAGGAAACAACTGCCATCCTTCTGACTTGGCTTTTCCTTCTTTTAGCCCTTCATCGGGATTGGCAAAGCAAGGCAAGAGAAGAAGTCCGTCGCGTTTGTGGCGATAAACGGCCTCCGACGGCGGATGACTTGAGTTCTCTTAAGATTGTAACGATGATAATCAACGAAACACTTCGGCTCTACCCGCCGGTCGTGTTAGTGACGCGGTATGCAAGAACAGACCTTAAGTTAGGGAGGATTGCCATTCCGGCGAATACAGAACTCATTCTGGCCTTGACGGCTACCCATCATGATCCCGACGTTTGGGGAGAAGATGCTAAGGAATTCAACCCTCTGAGGTTTGAAGAGCCTGGGAAACATCTGGGCATGTTCCTGGCATTTGGACTCGGGCCAAGAATCTGTGTTGGTCAGACAATGGCCATGGCCGAAGCGAAGGTGGTTCTGGCGACCCTCCTTCAACGATACTCTTTCACGGTGTCACCCTCATATGTCCATTCCCCGAGGTTCCTTGCAAGTCTGCAGCCTCAATTTGGTGCTCAGATCGTCTTCACTAAGATATCAAATTGA 1512 47.75 MQFLLQLLFFLTIIILFKFCYSTLWLPLRIHFHFRKQGIRGPPFRPFLGNALELRLSFAEALAKTIPFNHDVLPLAIPFYHRWSTAYGKRFLHWFGSVPQLALTDPDSLKEIFMKTGKSFLKVKFNPLAKSLFADGISQLEGDKWVLHRRIVTQAFTLDRVKGWVPEFVASATTMAEKWEALNEGRDEFEIEVHKEFHNLSADIISRTAFGSSFEEGKDIFDLQEQQMQLFFDNFAVLGQKIRFLPTQMNRKRWRLEREVRKSIRRLIEMNDQTSGNSTNLLSLLTSSYRNQNGEEERLTMDEIIDECKAFYFAGKETTAILLTWLFLLLALHRDWQSKAREEVRRVCGDKRPPTADDLSSLKIVTMIINETLRLYPPVVLVTRYARTDLKLGRIAIPANTELILALTATHHDPDVWGEDAKEFNPLRFEEPGKHLGMFLAFGLGPRICVGQTMAMAEAKVVLATLLQRYSFTVSPSYVHSPRFLASLQPQFGAQIVFTKISN 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80650793 80652542 - Bma003172.1 Bma01g02310 76827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02310 503 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 7 496 - -
Bma01g02310 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Bma01g02310 503 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 SUPERFAMILY Cytochrome P450 30 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 Pfam Cytochrome P450 80 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma01g02310 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 496 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02310 Bma04g00204 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02310 Bma-Chr1:80650793 Bma04g00114 Bma-Chr4:901436 5.09E-132 dispersed
Bma03g00403 Bma-Chr3:3050112 Bma01g02310 Bma-Chr1:80650793 1.19E-08 transposed
Bma04g01160 Bma-Chr4:29965291 Bma01g02310 Bma-Chr1:80650793 3.76E-84 transposed
Bma08g00324 Bma-Chr8:4963882 Bma01g02310 Bma-Chr1:80650793 1.96E-77 transposed
Bma11g00481 Bma-Chr11:5971416 Bma01g02310 Bma-Chr1:80650793 1.67E-89 transposed
Bma14g02072 Bma-Chr14:44088059 Bma01g02310 Bma-Chr1:80650793 4.21E-90 transposed
Bma01g02310 Bma-Chr1:80650793 Bma04g00204 Bma-Chr4:1785399 1.67E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02310 - - rcn:112170346 623.624