Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02328 ATGGAGTTTCGAAAATCGTCTACTGTCTACAAGAAGCTCGCAATTGGCCGAAGTTTCAACGATAAGTCAGCCTACGATGGCGTGTTCGCTGCTCCGTCAAAGCGTGGAACTCCGGTCTTTTCTGCTGGTCTGGAGGATTATCGTGAGATTTTCGGTGGTTCGCGAGGCTCCAGTATTCCGATTCTTGATTTTTCGGCTTTACAAGAGAAAAAGCCATCGATTGATGTTCGGAACTCGAAGCTCGAATATTCCAAGGTTTTCGGGACCTTGGAAGAATTAGATTTTGCCGTACCTAATGAGGAACTAAAAGGCGAACCAAAGAAAGTTGACACTTCCTCTGAGAGACCTCTGAGCACAGCTGGAAGAGTATCGCCTCCAGTAGGGAAAGGTTCTTCTACGGATTTAGAAAAAGATGAAGTTTTCTCGCATGAATATCAATCATTGGACGCAATGAAAAAGTTTAACATGGCATATAACAAAGTCAACCAAGGAAGCAATGATAGTACAAAGGGGATTACCCATGTGGTTCAGCTTCAAGCTACTTCTGGTTATACATGTATATTTAACGAATTCAGTCCATTGCAGGCTAGTGAAGGTGGAAAGCCCGCATCTAAAGCAGATGACGATATTAGGAATAGAATTAAAGCTGTTGGATCAACAAGAGACACAAAAGATCGCCCTTCTAGTTTGGAACGACAGACTTCTAGAGCTAATGATTTTCAAAACAAAGATGATTGGTATGGTAACCATTCCCTTAAGATGAAGTCTGATTCATGCAACTTGGATCAAGGCTCGTGTTCTGCCGAGCCAACTATTTTTTCTAGGTCTGCTCAAGTTGGCAAAAATTTAAGTTATTCAGAGACATCAATGGCATCTAAATCTGAAGTCTGTGATGCTTGTGAGAAAGCTGGCATTGTTTGTACGCCTCCATGCTTTGATGAGGAAGTTGACATCAATTCAGTTGCTGCTGCCTCCATTGCAGCTTTGAGAAAGGCTATAGAAGATGCTGGAGCAAAGATAAAGATTGCGAAGGAGTTGATGGAAAGAAGGAAGGTGGGTCTTCATGGTCGGAAAATGAGCTTTGCTGATCAATTGAATGGTGAAGAGAGAAGAGAGAGTGGAGATTCATTTACTCTAGCCAGATCCAAAGATGAGAAATCTCAAGAAACATGTGGAAAACCAGAGGCTATGGTGAACCCTTCTTCTGAAATAAGAAATCAAAATTTGAGAGAATTACTAGAAGTTGCTAGTGTAGAAATCCAATCTAAGAATATTTCATCAGGTCGAGCTCATTGCCGACCTGAAAATGAACAGTTTTATGAACTTGATCGTGCAGATAACAAACCCTTTGAGAACGCTTACCATGATGATACCATTACAAAATCGCCCCACAAAACAACCGAGAAAACCATTGATAACCCAGAAGAGTTTTCTGTGACTCTACATAGGGTTGAGGCATCTAATGGGAAAGAGTGCGGGGAAGAGAAAATACATGTAGTTAAAGAAAAAGGGTTTTGCAAGGAATTAAAGTTAGCTAGAGAAATGCATTTTGAAGAAGATGACGAAAATACAGCTACAACGATTCAAAAACTGGATGAAACTGAAGAGAGAGTTGGAATATCTTATGAGAAGGAAAAATGTGGAAGCAGAGAAAAAGAGAATCAACAAAAATTAGTGAAGGACAACGAAAAAATTGAGACACAGGAGTTGGAAGAAAACACTGGGAAGAAAGAAATAAAAGCTGATGAGTGTGTAGAGGATGAGAAGTTTAAAATAATTTTCAAGCAAAATGAAAATGAGACTACAAAAATGAGATTAGAAGAAAAGATTTTGTCTGCGGAGAAGATACTGATAAGGAAACCTGCCGAAGTTGATGAACTTGGCAGAGTTAAAGATTGTATCTATGACTTTCAAATTGGAGAGGAAACGGAACTCGAACAAAATGGCGAATCTCGAGGAAATAAAAAGCATCAAAAGGCTGGTGAGGATGAAGAAATGATTGCAGACCTTTCCAATCAGATTGAAGAAAATGGAAAAATTTGTGAACCTTTTGAAGGAAAGAGAATAGATTTGAAGTTTGATAAAATTGCAGAAACTGATATTAAAATAACTCAAGATGGTCTAAATTTCTGGGAGAGTAGACTTGAGGTAACCGAGGACTTGTGTAATTGGAACTCAAGTGATAATCTTCTGAACAAAAATGGAGGAGCTTGTGAAAATTTGGATCATGGTAAAATAGTGGAAGGAATTTCCAATCATCCTTTGTGTGAAGATTCTAAAAATAACTTTGATCATCCTTTATGTGAAGACTCTAGAAATAAAATGGAAGTAGTTAAGGCTTCTGTTGAAACCGAAAGAATTGAGAAAGATTCGGAGGAACTTATGCAAGTAAATGAGGTGGAGGAAAATGCATCTCTTAGAGAACTCCTTTCCTTGCTGAAGACACTTTTATTATACTCGAGAGTGAAATGGAAAGTTCAAATGCAGTGGAAGAATTTACACAGACTTTCTCATCTGATCCACACAAAGACACTGGATAGAGAAACAAATCAAAATGTGAGAGTTATTGATGTGAACAATTCAGGGCAGGCTCCTCAATCTGAAATATGTGAAAATAAGAAAAGCCAAATCACAGCCATTGATGATGAGAATGGTCCAGTGGCCTCGCCGACTGAAGATCAGGAAATCAGCGATACTATGAATCATGGAAATAATAGGATGACATCTGATTGGCCTCATTTATCTGAAGAAGATAAATTTATTAAGAAGACACTGGATAGAGAAACAAATCAAAATGTGAGAGTTAATGAGGAGAAGCATCAAACAACCCAAACATTGGAGGACATGGGAATGAATGATGCTTTGCCGAATGAAGGCAGGCTGGAATCGGAGGTAAACAATCAAGAGTATGCACACACTAATGGTATGCATGAAGGAACAGAAAAATCTTGCATATTTAACAATGCAGAGCGTGTGGCAAAGGCCCTTGCGGAGAAGAACTTCCGAGATCGTCTTGTGCAGAAAGAACAAGCAGAAAGAAATAGATTAGCTGAATCTCTTGATGCTGATGTAAAAAGGTGGTCGAGTGGAAAAGAAGGAAATTTGCGTTTGTTGCTTTCAACTCTACAATATATACTTGGGCCAGATAGTGGGTGGCAGCCAATTCCTCTAACAGATATCCTTGCAACGTCTGCGGTTAAGAAAGCTTATCGTAAAGCAACTCTGTGGGTTCATCCCGACAAATTACAACAACGGGGGGCAAGTATCCAGCAGAAGTACATTTGCGAGAAGGTTTTTGATCTTCTGCAGGCAGCTTGGAACAGATTCAACACGGAAGAGCGATAG 3345 39.43 MEFRKSSTVYKKLAIGRSFNDKSAYDGVFAAPSKRGTPVFSAGLEDYREIFGGSRGSSIPILDFSALQEKKPSIDVRNSKLEYSKVFGTLEELDFAVPNEELKGEPKKVDTSSERPLSTAGRVSPPVGKGSSTDLEKDEVFSHEYQSLDAMKKFNMAYNKVNQGSNDSTKGITHVVQLQATSGYTCIFNEFSPLQASEGGKPASKADDDIRNRIKAVGSTRDTKDRPSSLERQTSRANDFQNKDDWYGNHSLKMKSDSCNLDQGSCSAEPTIFSRSAQVGKNLSYSETSMASKSEVCDACEKAGIVCTPPCFDEEVDINSVAAASIAALRKAIEDAGAKIKIAKELMERRKVGLHGRKMSFADQLNGEERRESGDSFTLARSKDEKSQETCGKPEAMVNPSSEIRNQNLRELLEVASVEIQSKNISSGRAHCRPENEQFYELDRADNKPFENAYHDDTITKSPHKTTEKTIDNPEEFSVTLHRVEASNGKECGEEKIHVVKEKGFCKELKLAREMHFEEDDENTATTIQKLDETEERVGISYEKEKCGSREKENQQKLVKDNEKIETQELEENTGKKEIKADECVEDEKFKIIFKQNENETTKMRLEEKILSAEKILIRKPAEVDELGRVKDCIYDFQIGEETELEQNGESRGNKKHQKAGEDEEMIADLSNQIEENGKICEPFEGKRIDLKFDKIAETDIKITQDGLNFWESRLEVTEDLCNWNSSDNLLNKNGGACENLDHGKIVEGISNHPLCEDSKNNFDHPLCEDSRNKMEVVKASVETERIEKDSEELMQVNEVEENASLRELLSLLKTLLLYSRVKWKVQMQWKNLHRLSHLIHTKTLDRETNQNVRVIDVNNSGQAPQSEICENKKSQITAIDDENGPVASPTEDQEISDTMNHGNNRMTSDWPHLSEEDKFIKKTLDRETNQNVRVNEEKHQTTQTLEDMGMNDALPNEGRLESEVNNQEYAHTNGMHEGTEKSCIFNNAERVAKALAEKNFRDRLVQKEQAERNRLAESLDADVKRWSSGKEGNLRLLLSTLQYILGPDSGWQPIPLTDILATSAVKKAYRKATLWVHPDKLQQRGASIQQKYICEKVFDLLQAAWNRFNTEER 1114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80780978 80787485 + Bma003190.1 Bma01g02328 76845

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02328 1114 MobiDBLite consensus disorder prediction 101 136 - -
Bma01g02328 1114 Gene3D DnaJ domain 987 1114 IPR036869 -
Bma01g02328 1114 PANTHER AUXILIN-LIKE PROTEIN 1 6 969 - -
Bma01g02328 1114 PANTHER AUXILIN-LIKE PROTEIN 1 988 1114 - -
Bma01g02328 1114 SUPERFAMILY Chaperone J-domain 989 1113 IPR036869 -
Bma01g02328 1114 MobiDBLite consensus disorder prediction 366 399 - -
Bma01g02328 1114 MobiDBLite consensus disorder prediction 216 232 - -
Bma01g02328 1114 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 6 969 - -
Bma01g02328 1114 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 988 1114 - -
Bma01g02328 1114 MobiDBLite consensus disorder prediction 216 243 - -
Bma01g02328 1114 MobiDBLite consensus disorder prediction 366 391 - -
Bma01g02328 1114 Coils Coil 326 346 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02328 - - - bhj:120085690 354.755
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02328 Bma-Chr1:80780978 Bma03g00985 Bma-Chr3:10546960 1.35E-58 dispersed
Bma01g02328 Bma-Chr1:80780978 Bma06g00115 Bma-Chr6:1599957 3.64E-26 wgd
Bma01g02328 Bma-Chr1:80780978 Bma09g00084 Bma-Chr9:2054204 5.61E-14 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g969 Blo01g01570 . . . . . . Bma01g02328 . . Cma01g01918 . Car01g01499 . . . . . . . . . . . . . . . . . . Cone4ag1922 Cone7ag1834 . . Lsi04g01688 Csa03g04228 Chy04g00487 . . . . . . . . . . Cmo01g01981 . . . . . . Cpe02g00118 . . . . . . . Cla05g01924 Cam05g2061 Cec05g2074 Cco05g2125 Clacu05g2055 Cmu05g1932 Cre05g2055 . . . Cme04g00546
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008012 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 8 1 0 35