Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02344 ATGGCGGATTCTGGCTCTGGCCCTGGTAAGACGATGTGGTGTTCAGTCCCTGAAAGGCTCCAGCTCCATGGGGCTATGCTTGCTTTGCAGTTTGGATATGCAGGGTTTCATGTGGTTTCTAGGGCTGCCCTTAATATGGGCATTAGTAAGCTGGTCTTTCCGGTCTACAGAAACATCATCGCCCTCGTTTTGCTCCTTCCATTTGCGTACTTTCTGGAAAAGAAGGAGAGGCCTGCTATTAATCTTAACTTTCTTATCCAGTTCTTCCTTCTTGCACTCGTTGGAATTACAGCAAACCAAGGATTCTACTTGCTGGGTCTGGATAACACCTCACCCACTTTCGCGTCGGCGATTCAAAACTCAGTTCCGGCCATTACCTTTCTTATGGCCGTCGTACTCCGAATAGAACAAGTGAGATTGAACAGAAAAGATGGCATAGCAAAGGTTCTCGGTACAGTCAGCTGCGTCGCCGGAGCGACGGTGATAACTCTCTACAAGGGTCCGACCATATACAGCCCATCCCCGTCTCTACAAATGAGCCCGAGCGAGCCAATTTTCCCTTCCCTAGGCGACGCAAACGGCAAGAGCTGGACCCTAGGGTGCATCTACCTCATCGGCCACTGCCTATCCTGGTCCGGATGGCTCGTTCTACAGGCGCCGGTGCTGAAAAAATACCCAGCTCGGCTTTCCGTCACGTCCTACACTTGCTTTTTCGGACTAATTCAGTTCATTGCCATCGCTGCTTTCGTGGAAAGAGACTCCCAAGCTTGGCTCTTCCACTCCGGCGGAGAAATCTTCAGCGTTCTGTACGCGGGAATAGTGGCGTCTGGTATTGCGTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCCGTCTTCGTCGCTGTTTATCAACCTGTTCAGACCCTCGTTGTCGCTATCATGGCTTCACTTGCTTTAGGCGAGCAGTTCTATTTGGGAGGAATCATTGGAGCGGTGCTGATAGTCATAGGATTATACCTTGTTCTCTGGGGAAAAAGTGAAGAAAGAAAGCTAGCCCTAGAAAAGGCAGATATCCTGATCCAGTCCGCTGCGGACCACAGCAACAACAGAACAACCGCACGTATCAATCCGTCCCTTACACAACCCCTCCTTCCTACGTCAACGGAAAACGTTTGA 1161 50.56 MADSGSGPGKTMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALVLLLPFAYFLEKKERPAINLNFLIQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVVLRIEQVRLNRKDGIAKVLGTVSCVAGATVITLYKGPTIYSPSPSLQMSPSEPIFPSLGDANGKSWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFIAIAAFVERDSQAWLFHSGGEIFSVLYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEQFYLGGIIGAVLIVIGLYLVLWGKSEERKLALEKADILIQSAADHSNNRTTARINPSLTQPLLPTSTENV 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81025430 81027367 - Bma003210.1 Bma01g02344 76861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02344 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 342 - -
Bma01g02344 386 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020|GO:0016021
Bma01g02344 386 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020|GO:0016021
Bma01g02344 386 PANTHER WAT1-RELATED PROTEIN 14 368 - -
Bma01g02344 386 PANTHER WAT1-RELATED PROTEIN 14 368 IPR030184 GO:0016021|GO:0022857
Bma01g02344 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 165 - -
Bma01g02344 386 MobiDBLite consensus disorder prediction 366 386 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02344 Bma01g00742 CCT
Bma01g00742 Bma01g02344 ECH
Bma01g02344 Bma01g00742 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02344 Bma-Chr1:81025430 Bma04g00745 Bma-Chr4:7999605 2.87E-82 dispersed
Bma06g00629 Bma-Chr6:33430490 Bma01g02344 Bma-Chr1:81025430 4.62E-57 dispersed
Bma05g00755 Bma-Chr5:44089138 Bma01g02344 Bma-Chr1:81025430 7.86E-42 transposed
Bma07g01050 Bma-Chr7:42231552 Bma01g02344 Bma-Chr1:81025430 1.16E-69 transposed
Bma14g00048 Bma-Chr14:605173 Bma01g02344 Bma-Chr1:81025430 2.02E-40 transposed
Bma14g00835 Bma-Chr14:9363049 Bma01g02344 Bma-Chr1:81025430 4.93E-72 transposed
Bma01g00742 Bma-Chr1:6828221 Bma01g02344 Bma-Chr1:81025430 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02344 - - zju:107420453 650.588