Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02347 CTCAAGGGCTATGATATGGGCGCTCTTGCCCCAGTTTGGCCTTGGATTCCCGAAGACGATATTTTGTTGAAGAACGCTGTTGAGGCTGGGGCTTCCTTGGAATCACTTGCTAAAGGTGCTGTGCAGTTTTCTCGACGATTTTCTGCTAAAGAAATACAAGATCGGTGGCATTCTCTTCTTTATGATCCTATTATTTCTTCTGATGCCTGTAGTCGTATGATTGATTTTGAACGTTCAGCAGTGAATATTCCTTTAAGGTTTGACAAAGGTGGAATTTTAAAAGATAACAAATCTGTCTCTGGTAAGAGGAAATCAAAAAGTGTTCGCAGTTGTTACTATGCTTTGCGTAAAAGGATTTGCCATGAGCCATTCGATTCTATGGATCTTGGTTTTCTTGTTGGGCCAGGCTATGAGAATTGTGCTGAAAACAACAATGAGTCATTTTCTGGAAATGGCATTCTCTCAGAACCTATATTGAGTAATCAGGGAACAGATGTAGGCATTTTGCATAATGATATTCTTCAAGTTGTCGTTGATGGAGACAACGATGACCATATCTTTGAAGCCAGATTTCAGCAATCAATAGATGGGGGTTTTCCGATGGAGCAGAATAACATGCGCAATGGAATTCCTGATTCTTTTATGGAGAATCAGCCTCTCTCTGGAGATGTTTCTAGAGTGGATGAGTTGAGTGAGACAGAAAACTTTTCCATGCATGCCCTGTTCAAACCTGACGATTTGGAAGGAAAATCATCATTTTCATTTGGCCAAATCAACAGTGTCGAGGGTAACATGGGTTTGGAATTTGAAGAGCACGAGATGTTTAATTCACCCATTTCAGATTCTGGTGCATCATTTCACAACCCAGAGTATTCGTCTCCTCTTAGTGGGATGTCCATATGGAGAACATTCTCAGCACCAGATTTGCCAATTGATGTCGGACTTGGAGAAACAGATATCCAAACATTAGATAATTTTGACTTACCTTATGATGATGATATCCAGAACATAAGGACGTCCAACTATGATTCTCACTCAGATTCAAAAAATAATGAAGTGCCGCATGATCATTTTAAAATCCCAACTGCTGAGAATTATTTGGCAGAATTGTCCAATTCGCTTTTGAATTTAACAAATGAAGAGGATGAACTTCTCATCATGGATGTCGATGGACAAGGCGAGATTGAGAAATCCTATTATGATGGATTGAGCTCACTTTTGGTGAATTCACCAATTAATGTTAATCAAGAGCAGAACCCTAATCCAAGTAATGCAGAAGCATCATGTGCTTCAGATGCACATCTTGTGGATGATTCGGGTGCATGTACTGGAGAACCATATGCAAAGGGTCCTAACTGTGGCAATGAACTGGTATGCAGTTCTGAAGTGATACTGCCATTATTTGCAGTAAATGCTGAACATCATTTTTCTGAAGGACCTATATTCTGCACATTAAACACAATGGATCCAGAAATTCCAGATAATGATGATATTTCTTTGCCAAATCAGTTTAATCCATCAGCAGGTGCCTCTGCTGTGAATCCATTACAGGAATCCTCTGATCCATTTTTTTCATCTGTCAAGAATTTATCTGGAAACGAAGAAGCTGCTGATTTACTTCCGAATGTGATGCATAGGAACGAGAAACATTCTGGAAAGTCTTGTTTAACTTCTCAGCCAGTGGGACTAAATATTCTACCTGAAACAGGTCAAACCCATTTAATTTGTGATTCTACTGGCAAATTTGAATTGCCTCATGGTGATTCAACTTCTGTGACATCTAGAAATGCAAATATTGTTAGTTATCCAAGGTATGGGTCAACAATTGCAAGTGCCTGTGCTGTCCCGTCTGTAGTAACCCAAGGAGGAACCATTACCAATTCTAACCGAGAAAAGTCAGCACCTGATTCTGAAAGCTACAGAAACTATGATCCAACTAATACTTGTGTCATTAAACACGAAACGGATGTAATGGGCGCAACTGAAGATCATAGGCTAATATATTCAGAAGTAGCAGCTGTTGGTATTGCTGATATAGGACAAGGAGTCAATTCTCCTACTAATCAGGACGGGTTGCACATTGACAGTGAAAATGACGTACCTAATTTTTCAGATATTGAGGCAATGATACTTAACATGGACTTAGATCCAGATGACCAGGATTTGTATTCTTGTGAAGAAGTATCAAGATATCTGCATGAAGACACTAAGAAGACAATTATGAGGCTTGAGCAGGGTGCTGATTCTTATATGCAAAGAGCCATTGCATCTCATGGTGCATTTGCCATTTTGTATGGTAGACGATCAAAGCATTATATCAAGAAACCAGAGGTTTTACTTGGTAGAGCAACCGACGATGTTGTTGTGGATATTGACCTTGGGAAGGAGGGGCGTGCTAACAAAATATCTCGACGGCAGGCAATTATTAAAATGGACGAAGATGGATCCTTCTATCTACAAAATCTTGGTAAATGTCCAATCTCTGTAAATAACAAAGAAGTCTATCCAGGGCAAAGTTTAATCCTGAATTCAAGTTGCTTGATTGAGATAAGAGGAATGCCTTTCATTTTTGAGACAAACCTCTCTCCCGTAAAGCAATATTTGAATAGCATAGCCAATATAACATAA 2628 39.35 LKGYDMGALAPVWPWIPEDDILLKNAVEAGASLESLAKGAVQFSRRFSAKEIQDRWHSLLYDPIISSDACSRMIDFERSAVNIPLRFDKGGILKDNKSVSGKRKSKSVRSCYYALRKRICHEPFDSMDLGFLVGPGYENCAENNNESFSGNGILSEPILSNQGTDVGILHNDILQVVVDGDNDDHIFEARFQQSIDGGFPMEQNNMRNGIPDSFMENQPLSGDVSRVDELSETENFSMHALFKPDDLEGKSSFSFGQINSVEGNMGLEFEEHEMFNSPISDSGASFHNPEYSSPLSGMSIWRTFSAPDLPIDVGLGETDIQTLDNFDLPYDDDIQNIRTSNYDSHSDSKNNEVPHDHFKIPTAENYLAELSNSLLNLTNEEDELLIMDVDGQGEIEKSYYDGLSSLLVNSPINVNQEQNPNPSNAEASCASDAHLVDDSGACTGEPYAKGPNCGNELVCSSEVILPLFAVNAEHHFSEGPIFCTLNTMDPEIPDNDDISLPNQFNPSAGASAVNPLQESSDPFFSSVKNLSGNEEAADLLPNVMHRNEKHSGKSCLTSQPVGLNILPETGQTHLICDSTGKFELPHGDSTSVTSRNANIVSYPRYGSTIASACAVPSVVTQGGTITNSNREKSAPDSESYRNYDPTNTCVIKHETDVMGATEDHRLIYSEVAAVGIADIGQGVNSPTNQDGLHIDSENDVPNFSDIEAMILNMDLDPDDQDLYSCEEVSRYLHEDTKKTIMRLEQGADSYMQRAIASHGAFAILYGRRSKHYIKKPEVLLGRATDDVVVDIDLGKEGRANKISRRQAIIKMDEDGSFYLQNLGKCPISVNNKEVYPGQSLILNSSCLIEIRGMPFIFETNLSPVKQYLNSIANIT 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81054000 81058322 + Bma003213.1 Bma01g02347 76864

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02347 875 CDD FHA 774 858 IPR000253 GO:0005515
Bma01g02347 875 Gene3D - 733 866 - -
Bma01g02347 875 SUPERFAMILY SMAD/FHA domain 753 860 IPR008984 GO:0005515
Bma01g02347 875 Coils Coil 363 383 - -
Bma01g02347 875 ProSiteProfiles Forkhead-associated (FHA) domain profile. 778 834 IPR000253 GO:0005515
Bma01g02347 875 Pfam FHA domain 779 850 IPR000253 GO:0005515
Bma01g02347 875 PANTHER FHA DOMAIN PROTEIN 6 872 - -
Bma01g02347 875 SMART FHA_2 777 834 IPR000253 GO:0005515
Bma01g02347 875 PANTHER MICROSPHERULE PROTEIN 1 6 872 IPR037912 GO:0002151|GO:0031011|GO:0071339
Bma01g02347 875 Pfam N-terminal region of micro-spherule protein 15 81 IPR025999 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02347 - - - zju:107412700 753.051
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02347 Bma-Chr1:81054000 Bma01g02353 Bma-Chr1:81158016 9.55E-44 proximal
Bma01g02347 Bma-Chr1:81054000 Bma09g00099 Bma-Chr9:2700662 1.21E-41 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1039 . . Bda01g00507 . Bpe02g00366 . . Bma01g02347 . . Cma01g01943 . Car01g01518 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo01g02005 . . . . . . Cpe02g00095 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001875 2 6 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 0 1 1 11 13 2 67