Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02359 ATGTCGACCGGAATCGGAAAATGCAGCAAAATCCGCCACATTGTACGGCTGCGTCAGATGCTGCGGCGGTGGCGCAATAAGGCGAAGATATCAGCCAACCGCCCGCCGCCGGATGTGCCGGCGGGACACGTAGCGGTGTGCGTGGGAACTAACTGTACCAGATACGTGGTGCGAGCTACGTACTTGAACCATCCGATATTCAAAAGCCTTCTTGTTCGGGCTGAAGAGGAATACGGGTTCAGTCACCAAGGTCCGCTGCTGATACCTTGCGACGAGTCGGTTTTCGAAGAAGTCATCCGCCACGTTGCCAGGTTCGAATCGGGAAACTCCGGCCGGTACGCGAACCTAGATGACTGCCAGAGATACTGCCATGTCGGTACCTTAAATAACCTCGATTTCTGGCCGGAATCAAGACCGTTACTTCCCAGTTCAGGAGAGAAAACCATTTGGTAA 453 54.08 MSTGIGKCSKIRHIVRLRQMLRRWRNKAKISANRPPPDVPAGHVAVCVGTNCTRYVVRATYLNHPIFKSLLVRAEEEYGFSHQGPLLIPCDESVFEEVIRHVARFESGNSGRYANLDDCQRYCHVGTLNNLDFWPESRPLLPSSGEKTIW 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81293310 81293762 + Bma003230.1 Bma01g02359 76876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02359 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 143 IPR003676 GO:0009733
Bma01g02359 150 Pfam Auxin responsive protein 16 100 IPR003676 GO:0009733
Bma01g02359 150 PANTHER SMALL AUXIN-UP RNA-RELATED 6 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02359 Bma-Chr1:81293310 Bma03g00579 Bma-Chr3:4835449 2.71E-60 dispersed
Bma12g00589 Bma-Chr12:26003070 Bma01g02359 Bma-Chr1:81293310 2.55E-17 dispersed
Bma01g02359 Bma-Chr1:81293310 Bma15g00950 Bma-Chr15:35699755 5.07E-21 wgd
Bma01g02359 Bma-Chr1:81293310 Bma04g00239 Bma-Chr4:2063846 1.30E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02359 K14488 - qsu:112012151 246.128