Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02374 CTATGTTATAACAATGTGGTCCTGTTCAACTGCTCTTTTTTTTTTACTGAACTGATGATAAATGAATCTGCAGGAGTGTTTTCGACGACATTCAAGATAGTAAACCGATGCGATCACACAGTTTGGCCTGGCATTTTATCCAATGGCGGAGTTCCATCGTTTTCCACCACCGGCTTCGCGCTTCAGACTGGAGAGTCCAAAGTCCTCACCGCGCCGACGTCGTGGGGTGGTCGATTTTGGGGAAGGACTTACTGCTCCGAAGATTCGACCGGAAAGTTTTCCTGCGTAACAGGTGATTGTGGCTCCAATACGATTGAATGCGCTGGCAAAGGCGCCGCACCGCCGGCTACTCTAGCCGAGTTCACTCTAGACGGTTACGGTGGATTTGATTTCTTCGATGTTAGCTTAGTCGACGGGTACAACCTCCCTATGCTGGTGGTTCCCCAGGGAGGCACCGGCCAGAACTGCACTTCTACTGGGTGCGTGGTAGATCTGAACAGCGCATGCCCATCGGAGCTGAAGGTGACGAGCGTGGACGGTAGCGAGAACGTAGCTTGTAAGAGCGCTTGCGAAGCATTTGGGAAACCGGAGTATTGCTGCAGCGGCGCGTACAATTCACCCGATATATGCCAGCCGTCGTCTTACTCTCAAACGTTTAAAAACTCGTGCCCACGTGCATACAGCTACGCCTACGACGATAAGACGAGTACCTTCACATGTGCTTCTGCCGATTATGTGATCACTTTCTGCCCATCTCCGACGACCAGGTAA 771 51.49 LCYNNVVLFNCSFFFTELMINESAGVFSTTFKIVNRCDHTVWPGILSNGGVPSFSTTGFALQTGESKVLTAPTSWGGRFWGRTYCSEDSTGKFSCVTGDCGSNTIECAGKGAAPPATLAEFTLDGYGGFDFFDVSLVDGYNLPMLVVPQGGTGQNCTSTGCVVDLNSACPSELKVTSVDGSENVACKSACEAFGKPEYCCSGAYNSPDICQPSSYSQTFKNSCPRAYSYAYDDKTSTFTCASADYVITFCPSPTTR 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81385966 81386736 + Bma003245.1 Bma01g02374 76891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02374 256 CDD TLP-PA 30 250 - -
Bma01g02374 256 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bma01g02374 256 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Bma01g02374 256 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Bma01g02374 256 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Bma01g02374 256 SUPERFAMILY Osmotin, thaumatin-like protein 29 252 IPR037176 -
Bma01g02374 256 ProSiteProfiles Thaumatin family profile. 28 251 IPR001938 -
Bma01g02374 256 PIRSF PR5 3 256 IPR001938 -
Bma01g02374 256 Gene3D Thaumatin 29 251 IPR037176 -
Bma01g02374 256 PANTHER BNAA02G17480D PROTEIN 14 254 - -
Bma01g02374 256 Pfam Thaumatin family 35 251 IPR001938 -
Bma01g02374 256 SMART tha2 31 251 IPR001938 -
Bma01g02374 256 PANTHER OS03G0233200 PROTEIN 14 254 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02374 Bma05g00168 CCT
Bma01g02374 Bma05g00168 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02374 Bma-Chr1:81385966 Bma09g00169 Bma-Chr9:6244082 7.60E-114 dispersed
Bma02g00715 Bma-Chr2:30599211 Bma01g02374 Bma-Chr1:81385966 1.38E-112 transposed
Bma13g01154 Bma-Chr13:44738564 Bma01g02374 Bma-Chr1:81385966 2.88E-15 transposed
Bma01g00724 Bma-Chr1:6630585 Bma01g02374 Bma-Chr1:81385966 1.12E-56 wgd
Bma01g02374 Bma-Chr1:81385966 Bma15g00945 Bma-Chr15:34898244 3.57E-93 wgd
Bma01g02374 Bma-Chr1:81385966 Bma05g00168 Bma-Chr5:4778220 6.40E-94 wgd
Bma01g02374 Bma-Chr1:81385966 Bma06g00093 Bma-Chr6:1413130 4.00E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02374 - - zju:107420415 417.542