Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02412 ATGGAGTGGCAGAATCAGCAGCAAAACCAAGCAGAGCAACTGCCAATGCAACTGCCGATTGATCAATTGCCGAACCCAGATGGGTTGTACGTGAAAGTGATGACGGACGAGCAAATGGAGCTTCTCCGGCGACAGATCTCCGTCTACGCTACCATTTGTGAGCAGCTTGTCGAGATGCACAAGGCGATGACTGCCCAACAGGACATAACAGGAATGAGGTTGGGGAATCTCTACTGTGATCCAATGATGGCATCTAGCGGACACAAGATTACTGCTCGACAAAGGTGGACTCCAACTCCCGTGCAGCTTCAGATGCTGGAGCGTATTTTTGATGAAGGAAATGGCACTCCGAGCAAGCAGAAGATTAGAGAGATAACTGTAGAGCTCTCACAACACGGCCAAATCTCCGAAGCAAATGTGTATAATTGGTTCCAAAACAGAAGAGCTCGTTCGAAAAGAAAGCAGTCAGTTTCGATCCATAACAATGCAGATTCTGAAGTTGAAACCGAAGTCGAATCTCCAAAGGAAGAGAAGACGAAGCCGGTAGGCGCCCCATCGTTTGAGAATCTCGTACAGAGGACGGGTGATATTTATAACCAGAAATCGGAGTTGAATGCGGAAATGCAGTACTTGGATGCACAATCAAATAAAGGGGAGCCCGTTTTTCACTTCAGATCTTGTAATTCAGGCCATATGAGTGCCGTGCCGAGTCAAAGGACGGATCTGACTATCAACAAATTGGAAATTCCGGGTTACAGCTCCTACAATCCTTGCGACGGTTATGACCTGATTGAGTGA 798 47.24 MEWQNQQQNQAEQLPMQLPIDQLPNPDGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAMTAQQDITGMRLGNLYCDPMMASSGHKITARQRWTPTPVQLQMLERIFDEGNGTPSKQKIREITVELSQHGQISEANVYNWFQNRRARSKRKQSVSIHNNADSEVETEVESPKEEKTKPVGAPSFENLVQRTGDIYNQKSELNAEMQYLDAQSNKGEPVFHFRSCNSGHMSAVPSQRTDLTINKLEIPGYSSYNPCDGYDLIE 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81704465 81706266 + Bma003284.1 Bma01g02412 76929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02412 265 Gene3D - 95 160 - -
Bma01g02412 265 SMART HOX_1 91 158 IPR001356 GO:0003677
Bma01g02412 265 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Bma01g02412 265 PANTHER - 1 263 - -
Bma01g02412 265 MobiDBLite consensus disorder prediction 165 182 - -
Bma01g02412 265 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 263 IPR044559 GO:0003700
Bma01g02412 265 MobiDBLite consensus disorder prediction 152 182 - -
Bma01g02412 265 SUPERFAMILY Homeodomain-like 92 157 IPR009057 -
Bma01g02412 265 CDD homeodomain 93 155 IPR001356 GO:0003677
Bma01g02412 265 Pfam Homeodomain 93 153 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02412 Bma04g00291 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02412 Bma-Chr1:81704465 Bma10g00996 Bma-Chr10:23492870 1.06E-106 dispersed
Bma01g02412 Bma-Chr1:81704465 Bma04g00291 Bma-Chr4:2338187 3.01E-115 wgd
Bma01g02412 Bma-Chr1:81704465 Bma06g00075 Bma-Chr6:1177395 1.31E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56804 PF00046 Homeodomain 7.70E-18 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02412 - - bhj:120085747 353.214