Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02414 ATGGCTGCTAGTATGGATTTTTCACCTACATTTACATTAAGAGAGGGTGGTTACAATAAGACAAACGGTTCAGCTACGGAAGCTGAGGATGCCAGTGAGTTGAACAATGTAAAACAAATCAACAATGGGAAACCTCCTCGGCACCTCTCTGTGAAGCGCCATAGTATTAGCTCTATGGGGCTTCTTGGCCCGGCTGATTTGAGTTTGGATCCTGCGATTGATGACAGTAAGTCACCTGATGAAAAGAGAGAATTCATACCTGTTTTCAGATCGGGAAGTTGTGCTGAAAGAGGACCTAAACAGTACATGGAGGATGAACATATTTGTATAGATGATCTCTACAAACATATAGGTTCAATCGATGATACCATATCTCCATTGGCTTTTTATGGGGTGTTTGATGGTCATGGTGGTACAGATGCAGCATCATTTGTGAGAAACAATATCCTCAGATTCACAATTGAGGATTCTCATTTTCCAGTTTGTATGGAGAAAGCAATTAAGAGTGCTTTTCTGAAAGCTGATAATGCATTTGCAGACACTAGTTCACTAGATGTATCCTCCGGTACGACGGCCCTAACTGTCTTTATCTTGGGGAGATCAATGATAATTGCCAATGCTGGTGATTGTCGGGCTGTTTTGGGAAGGCGGGGCAGAGCAGTTGAGATGTCGAAAGACCACAAACCCAACTGCATGTACGAAAGAAGGAGAATTGAGAAACTTGGCGGAGTAATTTATGACGGCTATCTCAATGGCCAGCTATCTGTTTCTAGGGCCATAGGAGATTGGCACATGAAAGGTGCCAAGGGTCAGCCATGTCCATTGAGTGCTGAGCCGGAGTTGCAGGAAATTGTCCTGACCGAGGACGACGAGTTTCTAATATTGGGATGCGATGGGCTGTGGGACGTAATGAGCAGTCAGTGCGCTGTTACTATGGCAAGGAAAGAGCTGATGCTCCACAATGACCCTGAAAGATGCTCAAGAGAGTTGGTGAGCGAGGCCCTCAAGCGCAATACTTGTGATAATTTGACGGTCGTTTTGATCTGTTTTTCTCCTCAACCTCCCCCTCGGATAGAGATACCTCCATCTCGAGTAAGGCGGAGTATTTCAGCCGAGGGTTTGAACTTGTTGAAAGGCATACTAGACTCTAGCTGA 1155 45.11 MAASMDFSPTFTLREGGYNKTNGSATEAEDASELNNVKQINNGKPPRHLSVKRHSISSMGLLGPADLSLDPAIDDSKSPDEKREFIPVFRSGSCAERGPKQYMEDEHICIDDLYKHIGSIDDTISPLAFYGVFDGHGGTDAASFVRNNILRFTIEDSHFPVCMEKAIKSAFLKADNAFADTSSLDVSSGTTALTVFILGRSMIIANAGDCRAVLGRRGRAVEMSKDHKPNCMYERRRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGAKGQPCPLSAEPELQEIVLTEDDEFLILGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVSEALKRNTCDNLTVVLICFSPQPPPRIEIPPSRVRRSISAEGLNLLKGILDSS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81713453 81715302 - Bma003286.1 Bma01g02414 76931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02414 384 CDD PP2Cc 89 350 IPR001932 -
Bma01g02414 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Bma01g02414 384 MobiDBLite consensus disorder prediction 1 51 - -
Bma01g02414 384 SUPERFAMILY PP2C-like 84 352 IPR036457 -
Bma01g02414 384 Gene3D - 71 353 IPR036457 -
Bma01g02414 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Bma01g02414 384 SMART PP2C_4 80 348 IPR001932 -
Bma01g02414 384 MobiDBLite consensus disorder prediction 14 43 - -
Bma01g02414 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 372 - -
Bma01g02414 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bma01g02414 384 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02414 Bma04g00294 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02414 Bma-Chr1:81713453 Bma02g00034 Bma-Chr2:353468 7.72E-112 dispersed
Bma04g00097 Bma-Chr4:786381 Bma01g02414 Bma-Chr1:81713453 4.47E-40 dispersed
Bma10g01306 Bma-Chr10:46439350 Bma01g02414 Bma-Chr1:81713453 6.28E-26 transposed
Bma02g00942 Bma-Chr2:49321058 Bma01g02414 Bma-Chr1:81713453 6.84E-72 transposed
Bma01g02414 Bma-Chr1:81713453 Bma04g00294 Bma-Chr4:2356598 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02414 K14803 - qsu:112023621 607.446