Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02422 ATGGATCAGGGAGCGATTAGTGTTTCAGCTATGGATGCTTTCCAGAAGCTAGAAAAGGTGGGAGAAGGAACATATGGGAAGGTGTATAGGGCTGTAGAAAAGGCCACCGGAAAGATCGTAGCCCTCAAGAAAACACGTCTTCATGAGGATGAGGAAGGTGTCCCACCCACCACTCTCCGGGAGGTCTCCATTCTGCGAATGCTTTCTAGGGATCCTCACGTCGTCAAGTTGCTGGATGTCAAACAAGGGCAGAATAAGGAAGGAAAAACGGTTCTATACTTAGTCTTTGAGTACATGGACACTGATCTCAAAAAATTTATCAAAAGCTTCCGTCAAACGGGAGAGAACATTCCTGAAAAAACTGTCAAGAGTTTTATGTTTCAACTTTGCAAAGGTGTTGCTTTCTGTCATGGTCATGGAATCCTCCACAGGGATTTGAAACCTCACAATCTCTTGATGGACCGAACGACAATGACTCTAAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAAAAGTACACTCATGAGATATTGACTCTTTGGTACAGAGCACCTGAAGTCCTTTTGGGAACTACCCACTATTCCACCGCAGTTGATATGTGGTCTGTCGCCTGTATATTTGCTGAGCTTGTGACAAAGCAAGCACTTTTCCCCGGAGATTCTGAGCTGCAGCAACTCCTACATATTTTCAGGTTGCTAGGTACCCCAAATGAAGAAATGTGGCCAGGTGTAAGCAAACTAATGAACTGGCACGAGTACCCCCAGTGGAAAACCCAAAGCCTAGCAACTGCTGTTCCCGGCTTGGACGAAAAGGGGCTGGATTTACTATCACAAATGTTGCATTACGATCCCTCCAAGAGGATTTCAGCTAAGAAAGCCATGGATCATCCTTATTTTGATGATGTTAACAAGGCTGCTCTC 936 45.09 MDQGAISVSAMDAFQKLEKVGEGTYGKVYRAVEKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVKLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPEKTVKSFMFQLCKGVAFCHGHGILHRDLKPHNLLMDRTTMTLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGTTHYSTAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEMWPGVSKLMNWHEYPQWKTQSLATAVPGLDEKGLDLLSQMLHYDPSKRISAKKAMDHPYFDDVNKAAL 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81851899 81853864 + Bma030303 Bma01g02422 76939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02422 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Bma01g02422 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bma01g02422 312 PANTHER CELL DIVISION PROTEIN KINASE 7 310 - -
Bma01g02422 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02422 312 SUPERFAMILY Protein kinase-like (PK-like) 9 307 IPR011009 -
Bma01g02422 312 PANTHER - 7 310 - -
Bma01g02422 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Bma01g02422 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Bma01g02422 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02422 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02422 Bma-Chr1:81851899 Bma15g00419 Bma-Chr15:4536492 1.94E-150 dispersed
Bma09g00009 Bma-Chr9:305375 Bma01g02422 Bma-Chr1:81851899 1.11E-42 dispersed
Bma11g00524 Bma-Chr11:6565236 Bma01g02422 Bma-Chr1:81851899 5.16E-22 dispersed
Bma15g01115 Bma-Chr15:44167246 Bma01g02422 Bma-Chr1:81851899 2.45E-42 dispersed
Bma01g02422 Bma-Chr1:81851899 Bma08g01208 Bma-Chr8:51074399 1.80E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66303 PF00069 Pkinase 9.90E-73 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02422 K07760 - csv:101208001 570.466