Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02471 ATGGCTTCCTTCGCAGCATCCAGAGCCGCAGCCTCCCTCGGCGTGTCCGAAATGTTGGGAAATCCTCTCAATTTCAGCGGGACCGCTCGCTCTGCTCCTCCCAATGCTTCAACGCCTTCCACCTTCAAGACTGTGGCTCTCTTTTCTAAGAAGAAACCCGCCAAGGCCAAGCCTGCCCCCGTTTCTTCAACTGATGATGAGCTCTCCAAGTGGTATGGTCCGGACAGGAGGATATACTTGCCAGAGGGGCTTTTGGACCGATCTGAGATCCCTGAGTACTTGACCGGAGAAGTCCCCGGAGATTATGGTTACGATCCTTTTGGTTTGAGCAAGAAGCCTGCTGATTTCAGCAAATACCAAGCGTATGAGCTGATTCACTCGCGGTGGGCTATGCTTGGAGCCGCCGGGTTTATCATACCCGAGGCCTTCAACAAATTTGGAGCTAACTGTGGCCCTGAGGCTGTTTGGTTCAAGACGGGAGCTCTCCTCCTGGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCCATCAACCTCATTTTGGCGGTGATTGCCGAGGTTGTTCTTGTCGGCGGCGCTGAATACTACAGAATAATCAACGTCCTGGATTTGGAGGACACGCTTCACCCGGGTGGTCCTTTTGACCCGTTGGGTCTGGCCAAGGATCCAGATCAGGCTGCCATTTTGAAGGTGAAGGAGATAAAGAATGGGCGGCTGGCTATGTTTTCGATGCTTGGATTCTTCGTACAAGCCTATGTTACCGGAGAAGGACCGGTGGAGAACTTTGCCAAGCATCTCAGCGACCCCTTTGGCAACAACTTGCTCACTGTGCTCGCCGGAAATGCAGAAAGAGCTCCTACCCTTTAA 870 52.41 MASFAASRAAASLGVSEMLGNPLNFSGTARSAPPNASTPSTFKTVALFSKKKPAKAKPAPVSSTDDELSKWYGPDRRIYLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPADFSKYQAYELIHSRWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLILAVIAEVVLVGGAEYYRIINVLDLEDTLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSMLGFFVQAYVTGEGPVENFAKHLSDPFGNNLLTVLAGNAERAPTL 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82382934 82384227 - Bma003344.1 Bma01g02471 76988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02471 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
Bma01g02471 289 Pfam Chlorophyll A-B binding protein 91 253 IPR022796 -
Bma01g02471 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Bma01g02471 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Bma01g02471 289 SUPERFAMILY Chlorophyll a-b binding protein 70 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02461 Bma-Chr1:82186277 Bma01g02471 Bma-Chr1:82382934 0 dispersed
Bma01g02471 Bma-Chr1:82382934 Bma14g00935 Bma-Chr14:10678062 5.31E-67 dispersed
Bma01g02471 Bma-Chr1:82382934 Bma01g01496 Bma-Chr1:29519144 1.13E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02471 K08916 - cpap:110818730 507.679