Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02495 ATGTGGTTGCCGTCAAAAAACACAGAGCCAAAAAGGGAAGGAGGGAATGGTCTGGTTGCAGTGGCCATCGACAAAGACAAAGGCAGCCAAAACGCTCTCAAATGGGCGATCGATCATCTTCTCCAGCGCGGCCAAACCGTCCTCCTCATCCACGTCAAGCTCCGGCTTCAATCTCTCTCCTCCTCCCCGACTCTTCCTTCCTCCTGGACGAACAACAATGACATTTCGTATGGAGGCACGGAGCCTGATTCCATAACCAAGGAGTTATTTCTTCCTTTTCGATGTTTTTGTACTCGTAAAGATATTCAATGCAGAGATATCATGCTCGAGGATGTGGACGTCGCCAAGGCGTTGATTGAATACGTCAGCCAAACTGCAATCGAGAATCTCGTGATCGGTTCGCCGGCCAAATCGACCTTTCTGAGATTCAAGGCGGTAGATATACCGAGCACGGCGCTGAAAGGAGCTCCAGATTTTTGCAATGTCTTCGTGGTATCCAAAGGAAAAGTCCAATCCATGCGTTCGGCCTCACGTCCTGCTCCGGCTGTGTCGCCTCTACATGCTCAACTACCAAAACAAAGCAATACTGTTTCGGATTTACTGGAACTCCATAGCCCGCAAGCTTCGATTAAGAAAGCCGCTCCGCCCCTTGAAGCACCGAGAAAATCTCAGGACGAGGTCGAGTTCGTCAGGTCGCCATTTACTCGGGAAAGATACACGGGAAGATCATATGGGGACACTTCGCAATCAGACTCCAATGAATCCTACGTTACATCTGGAAGGGAAAGTATAGATCGGCTCTTCTCTTCATTCTACAATAATCTCGAGTCTGGAAAACAATCACCGCTGCCTATTTCGAGGAGCAGAACGGAAGGGGAATTGGACATTAATCGTAGCTTCGAGTCGCTACAGTTAGGGAGGAGGTCGGTGGGAATGACCACACCTTCAGAATTTTCTGCTGTCTCGCAGGATAGCGAGAGATTGTCGACCGCTACACAGGCTAAGGAAGACGTCGAGAACGAGATGCGAAGGCTGAAGCTGGAGCTGAAGCAAACTATGGAAATGTATAGCACGGCCTGCAAGGAAGCCCTTTCGGCAACAAAAAAGGCAAAAGAGCTACAACGTTGGAAAGTGGAAGAAGAACAGAAATTCGAAGAGGCACGGCTGGCTGAGGAAGCTGCATTGGCCATTGTAGAGCAGGAAAAGGCCAAGTCCAGAGCTGCCATTGAAGCTGCTCAAGCAGCTAAAATGATAGCAGAACTGGAAGCCGAGAAAAGAATTCAAGCAGAAAGAAAAGCTCTGAAAGAAGCAGAAGAGAAGAAGAAGGCATTCGATGCTCTGGCACAGACGGACGTGAGGTATAGGAGGTACTCCATTGATGAAATCGAGGCTGCAACTGAGTACTTCTCTGAGTCTCGCAAGATTGGAGAAGGAGGTTATGGGCCAGTCTACAAGTGTTTCCTTGATCACACATCAGTAGCCGTTAAAGTTCTCCGTCCCGATGCATCTCAAGGAAGATCACAGTTTCAGCAAGAGGTTGAGGTGCTGAGCTGCATTCGTCATCCAAACATGGTTCTCCTTTTGGGAGCCTGTCCAGAATACGGCTGCTTAGTTTACGAGTTCATGGCCAACGGAAGCTTAGAAGACCGACTTTTCCGGCGAGGAAATACACGATCTCTTCCATGGCAGATAAGGTTCAAAATTGCAGCAGAGATAGGCACTGGCCTACTCTTCCTCCATCAGACCAAGCCAGAACCACTCGTCCACCGTGACCTCAAACCGGCAAACATCCTTCTGGACAGAAACTATGTAGTAAGATCAGCGATGTTGGCTTGGCTCGTCTAG 1845 49.11 MWLPSKNTEPKREGGNGLVAVAIDKDKGSQNALKWAIDHLLQRGQTVLLIHVKLRLQSLSSSPTLPSSWTNNNDISYGGTEPDSITKELFLPFRCFCTRKDIQCRDIMLEDVDVAKALIEYVSQTAIENLVIGSPAKSTFLRFKAVDIPSTALKGAPDFCNVFVVSKGKVQSMRSASRPAPAVSPLHAQLPKQSNTVSDLLELHSPQASIKKAAPPLEAPRKSQDEVEFVRSPFTRERYTGRSYGDTSQSDSNESYVTSGRESIDRLFSSFYNNLESGKQSPLPISRSRTEGELDINRSFESLQLGRRSVGMTTPSEFSAVSQDSERLSTATQAKEDVENEMRRLKLELKQTMEMYSTACKEALSATKKAKELQRWKVEEEQKFEEARLAEEAALAIVEQEKAKSRAAIEAAQAAKMIAELEAEKRIQAERKALKEAEEKKKAFDALAQTDVRYRRYSIDEIEAATEYFSESRKIGEGGYGPVYKCFLDHTSVAVKVLRPDASQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFRRGNTRSLPWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVVRSAMLAWLV 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82667761 82670237 + Bma003373.2 Bma01g02495 77012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02495 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Bma01g02495 614 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 143 - -
Bma01g02495 614 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 8 606 - -
Bma01g02495 614 Coils Coil 321 355 - -
Bma01g02495 614 Pfam Universal stress protein family 19 144 IPR006016 -
Bma01g02495 614 SUPERFAMILY Protein kinase-like (PK-like) 452 605 IPR011009 -
Bma01g02495 614 SMART serkin_6 469 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02495 614 MobiDBLite consensus disorder prediction 209 258 - -
Bma01g02495 614 MobiDBLite consensus disorder prediction 218 235 - -
Bma01g02495 614 Coils Coil 395 447 - -
Bma01g02495 614 Pfam Protein kinase domain 470 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02495 614 Gene3D HUPs 18 165 IPR014729 -
Bma01g02495 614 ProSiteProfiles Protein kinase domain profile. 469 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02495 614 MobiDBLite consensus disorder prediction 241 258 - -
Bma01g02495 614 CDD STK_N 18 168 - -
Bma01g02495 614 Gene3D Transferase(Phosphotransferase) domain 1 542 609 - -
Bma01g02495 614 Gene3D Phosphorylase Kinase; domain 1 447 541 - -
Bma01g02495 614 PANTHER OS02G0152300 PROTEIN 8 606 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02495 Bma-Chr1:82667761 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma01g02495 Bma-Chr1:82667761 Bma02g00064 Bma-Chr2:512939 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66307 PF00069 Pkinase 5.00E-24 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02495 - - twl:119993747 772.696