Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02501 CCAATGGCTTACAATCAGACTTCCATTAACAATGGTAAGTTTTCCACATCTCCAAACAACCTCGAGCTGCAAAACGGGTTAGAAATCAAGGCTGCTGTTGATTTCGATTACTCGAAACGAGCTCAATGGCTTCGCGCTGCCGTTTTGGGTGCGAACGATGGGCTAGTCTCGACTGCTTCATTAATGGTGGGGATTGGAGCTGTAAAACAAGACGTTAAAGCCATGATTCTAACTGGATTTGCAGGTCTAGTAGCTGGAGCTTGTAGCATGGCGATAGGAGAGTATGTTTCTGTGTATTCTCAACTGGAGATAGAGCTTGCTCAGATTAAAAGACACAAACAAAAAACGGTTGGAAGTTCCAGAGAAAAAGAAGATGAAGAAAAAGAGATATTGCCAAACCCTTTGCAAGCAGGAGCAGCTTCAGGTCTGGCATTTTCTTTAGGAGCAATGGTTCCTCTACTAGCAGCTTCGTTCATAAAAGACTACAAAGTGAGGCTTTGGGTGGTGGTCAGTGCAGTGACCTTGGCTTTGATGGCGTTCGGGTGGCTCGGAGCTGTGCTTGGCAAAGCCCCGATTGCTCGGTCCGCTACCAGGGTCTTGTTGGGGGGTTGGCTAGCCATGGCTATAACCTTTGGCTTGACTAAGTTAATTGGTTCCAGTGGGCTGTAG 669 46.94 PMAYNQTSINNGKFSTSPNNLELQNGLEIKAAVDFDYSKRAQWLRAAVLGANDGLVSTASLMVGIGAVKQDVKAMILTGFAGLVAGACSMAIGEYVSVYSQLEIELAQIKRHKQKTVGSSREKEDEEKEILPNPLQAGAASGLAFSLGAMVPLLAASFIKDYKVRLWVVVSAVTLALMAFGWLGAVLGKAPIARSATRVLLGGWLAMAITFGLTKLIGSSGL 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82725543 82726211 + Bma003380.1 Bma01g02501 77018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02501 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 219 IPR008217 GO:0005384|GO:0030026
Bma01g02501 222 CDD Nodulin-21 42 191 - -
Bma01g02501 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 15 219 - -
Bma01g02501 222 Pfam VIT family 127 214 IPR008217 GO:0005384|GO:0030026
Bma01g02501 222 Pfam VIT family 44 126 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00491 Bma-Chr1:4025154 Bma01g02501 Bma-Chr1:82725543 8.01E-07 dispersed
Bma01g02501 Bma-Chr1:82725543 Bma08g00451 Bma-Chr8:18138112 5.13E-80 dispersed
Bma01g02501 Bma-Chr1:82725543 Bma04g00363 Bma-Chr4:2924707 2.05E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02501 K22736 - zju:107406772 315.849