Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02502 | ATGGGTCGAAAGAAGCCGAATGCTCGGGAGGATGATGTGCCTGCTCAGGGAGGGGGTAAAGCAAAGAAGAAGGGGCTTTTAATAGACGACGACGAGTATTCCATTGGAACAGAAATATCTGAGGACTCGCAAGTTCAGGAGGAAACGGTTGCAACCACGGGGAAGAAGAAGGGTAGAAAGGGTAACTTAACAGCTTCACAATCAAAAGACGACGAAGAGGATGATGATTTTGTGCCGGAGATTGTTATCACTGGGAAAAAGAAGGGAAAATCAAAGAAGGGTAGTGGAAACAGCGTGTTTAGTGCATCAAGCTTTGGGTTGCTTGAGGAGGAAAACAATCAGGTTGTAAGCTTTTCAGGTAAGAAAAAGGGATCGAGGAATTCTAAGAAAACAGATAATTTGTTTAAAGACTCGTCGGCATTTGATGCCATTGATGATGAGAATGATGGAGAAGAGATTGATAGTGAGAGTAGGATTGACAAAGATGATGATGAGATTGTGCCAGTTATAACCGGAAAGAAGAAGCCATCCAAAGGTGGAAAGATAAGTAAGAGTACATTTCAAGCTTCAAATTTTGGTGGACTAAATGACGAAGATGATGATAAGGATGAAAAGAAAGATGTGGATGAAGATATTGCTCCTATTAGTTTCTCTGGTTTGAAAAAGAAGTCTTCCAATGCAACAAAGAGGAGTGGTAATCTTTTTAGTTCGACTGATGCTGGTGATGAAGGTCCTTCTGTATCAGAATCAGGCAGAGCTGGCGATGATCTCGTTGAGGATGGAGATGCCTCAGTTATTGCATTTTCTGGCAAGAAAAAGTCCTCAAAGAAGAAAAGTAATAGTGTTTTTGCTTCATTGGATGACATGAGTGCACTTGAAAGTGGAGTTGGAATTGGAGTTGAACCTGAAGTGCTGAGTGGTGGATCTAGTTATGTTGATGCTGACACCTCTGTGACCATCACGAAAGAGGTTGCAGAGTCTTCAAAAAATAAGAAAAAGAAGAAGAAGAGTGGAAGGACTGCTCAAGAGGAAGATGATTTGGATAAAATTCTTGCAGAGCTCGGTGAGGGACTGGCAGTACCAAAATCTGTTGTATCTGCTTCTCTTCCTCCAGAAGAGGTGAAATCTGATGTTCAACCTGAACCTGCTCTGCTTGTTGATGTGTCTGTGGAGAAGGAAGGTGAAGAAGAAAGTATGGAGTCAGCTGCAGCAAAGAAGAAGAAAAAGAAGAAGGAGAAGGAGAAGGAAAAGAAGGCTGCTGCGGCTGCTGTGGCTGCTGTGGCAGCAGCTGCAGATGAGAAGGCTGAAATAACTGAAGAAGTAAAAATCGAGATAGCAGAGCCTAAAAAGGGCACTGCTAAGAGTAAAGTTCCTGAGAAGAAAGTACCAAAGCATGTTAGGGAAATGCAGGAGGCAATGGCGAGGAGAAAAGAAGAGGAAGAAAGGAAAAAGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAAGCAAAGAGAAAGAAAAAGGAAAAAGAAAAGGAGAAGCTTCAGAGGAAGAAGTTGGAAGGCAAGCTTTTGACGGGGAAACAAAAGGAAGAACAGCGTAGGTTACAGGCAATGAAGAACCAATTTCTTGCAAACAGTGTGGGTTTGCCTCTTCCTGTTGCTGACTCTGGTGCACCAGTCAAACGACCCATTTACCAGACAAAGAAGACCAAAACAGCCCAACATCAAGCAAGTAGCGATGCATCTAAGGTAGTTGAGAACATAGAAGAAATTAAAAATCAGCCGGACCATGTGGCAGAGGTTGAATCTGTAGAGTTGAAAAAGATGGAAGATGTGGAAACAGTGAATGTGGATGAGAAATCTGAAATTTCTGAGCCTGTAGAAGATAATGGGTTGGAAGAAGAAGATGGCGATGAGGATGAATGGGATGCAAAGAGCTGGGATGATGCTGTCGTTGATCTTACTGTGAAAAGTGCATTTGCTAATGAAGAAGTTGACTCTGAAACAGAACTCGAGGTGAAGAAAGAGAAAAAGAGTGGCACACCAATTTCTGACCTTGCTGGTAATATATCATTTCCATGCTCTTTAATTCTCCTATTTTATTCAGATTCATATTTGCTTCGAAACTCATGTTGTTTCTCCCAAATGTTAATTTTTGGCACGTTCTTTTTTCTGGCAGCTACAAATGTTGGCAGCACACCAGCTCTTTCTGTCAACCACAGTTTTTCTTCCAAGGATGTTGAAGTTAGCAAAAAGCAGTCTGAGGTGGAAGTTGTGGATAATAACAAAAGAAAAAATGCTGTTGTTAAGAAGGAAGCTCCAAGATTAGATACTGCGTCTAAAAATAGTGAAAGTAATCTCCGTTCTCCCATTTGCTGTATTATGGGTCACGTTGACACTGGTAAAACCAAGCTTCTAGATTGTATCCGAGGAACTAATGTTCAAGAAGGTGAGGCTGGAGGTATTACCCAACAAATTGGAGCAACTTATTTTCCTGCAGAAAACATACGTGAAAGAACTAGAGAATTGAAAGCAGATGCAACTTTGAAAGTTCCTGGTCTACTTGTTATCGATACCCCTGGACATGAATCTTTCACCAACCTACGTTCCCGTGGTTCTGGTTTATGTGATATTGCAATTTTAGTTGTTGACATCATGCATGGTTTAGAGCCGCAAACAATAGAATCACTCAATTTATTGAAAATGAGGGACACAGAATTCATTGTTGCATTGAACAAGGTGGATAGACTGTATGGGTGGAAAACATGTCGAAATGCTCCAATTGTGAAGACAATGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTTAATATGAGGCTCACACAGATTATCACTCAATTCAAAGAACAAGGTTTAAATACTGAATTATACTATAAAAATAAAGAAATGGGGGAAACTTTCAGTATAGTACCAACAAGTGCTATAAGTGGGGAAGGTATTCCAGATTTGTTATTACTACTGGTCCAGTGGTCTCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAGTGCAGTGTACGGTGTTGGAGGTTAAGGTCGTTGAAGGCCATGGGACAACCATCGATGTTGTATTAGTTAATGGCGTGCTTCATGAAGGAGATCAAATAGTTGGTCCAATTGTTACTTCAATTCGGGCGCTATTGACACCACATCCAATGAAGGAACTCCGAGTTAAGTGTTTGTTTACGAATAATGGTTTCACCACTATTCTCTTACCTACCAGTTGCAGTAATATTTCCATAGTTGGCCCTTCTTTCTCTGTTGAACTGAACATCCATATCATGAATGTTCTTCCTATTTATCATATGGAATATGTGACCAAAAAATATGTCCTGTGGTTTCTAAGTGCAAATGTTTGGTTTGGCCTTGAGCATGCTATTGCCGGAACTGGTCTTTATGTGGTAGGTCCTGGCGACGACTTGGAAGACATTAAAGAATCATCCATGGAAGATATGAAGTCTGTCTTGAATAGGATTGACAAGAGTGGCGAAGGGGTTTGTGTGCAAGCATCTACACTGGGTTCGTTGGAAGCATTGCTGGAGTTTTTGAAGTCTCCTGCTGTTAGCATTCCTGTCAGTGGAATAAGCATTGGTCCTGTACATAAAAAAGATGTTATGAAGGCCAGTGTGATGCTTGAAAAGAAGAAGGAATATGCCACTATCTTGGCTTTTGATGTCAAAGTGACACCAGAGGCTCGTGAGCTTTCTGAGGAACTGGGTGTGAAAATTTTTATGGCGGACATCATTTATCACTTGTTTGATCAGTTTAAGGCATACATTGACAATATTAAAGAGGAAAAGAAGAAGGAAGCTGCTGAGGAAGCAGTATTTCCATGTGTCCTTAAGATTCTACCAAATTGTATTTTCAATAAGAAGGATCCAATCGTCTTGGGAGTGGATGTACTTGAAGGCATTGCCAAGCATTTTTTCTTGAAGGAAACTTTATTGATAATTGGCTCTTCCCCAGAGGAGCAGCAAAAGATGTTTGGTAGGCATTTTGAGCTCGAAGATGAACTTGATGATTTGTCCATCGAGGAGTGGAGGTTGGTGGTGAAATTGAAGACTCTTTTCAAGATACAATGA | 4134 | 41.07 | MGRKKPNAREDDVPAQGGGKAKKKGLLIDDDEYSIGTEISEDSQVQEETVATTGKKKGRKGNLTASQSKDDEEDDDFVPEIVITGKKKGKSKKGSGNSVFSASSFGLLEEENNQVVSFSGKKKGSRNSKKTDNLFKDSSAFDAIDDENDGEEIDSESRIDKDDDEIVPVITGKKKPSKGGKISKSTFQASNFGGLNDEDDDKDEKKDVDEDIAPISFSGLKKKSSNATKRSGNLFSSTDAGDEGPSVSESGRAGDDLVEDGDASVIAFSGKKKSSKKKSNSVFASLDDMSALESGVGIGVEPEVLSGGSSYVDADTSVTITKEVAESSKNKKKKKKSGRTAQEEDDLDKILAELGEGLAVPKSVVSASLPPEEVKSDVQPEPALLVDVSVEKEGEEESMESAAAKKKKKKKEKEKEKKAAAAAVAAVAAAADEKAEITEEVKIEIAEPKKGTAKSKVPEKKVPKHVREMQEAMARRKEEEERKKREEEEKLRREEEERLRQEELERQAEEAKRKKKEKEKEKLQRKKLEGKLLTGKQKEEQRRLQAMKNQFLANSVGLPLPVADSGAPVKRPIYQTKKTKTAQHQASSDASKVVENIEEIKNQPDHVAEVESVELKKMEDVETVNVDEKSEISEPVEDNGLEEEDGDEDEWDAKSWDDAVVDLTVKSAFANEEVDSETELEVKKEKKSGTPISDLAGNISFPCSLILLFYSDSYLLRNSCCFSQMLIFGTFFFLAATNVGSTPALSVNHSFSSKDVEVSKKQSEVEVVDNNKRKNAVVKKEAPRLDTASKNSESNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADATLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRDTEFIVALNKVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWSQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVGPIVTSIRALLTPHPMKELRVKCLFTNNGFTTILLPTSCSNISIVGPSFSVELNIHIMNVLPIYHMEYVTKKYVLWFLSANVWFGLEHAIAGTGLYVVGPGDDLEDIKESSMEDMKSVLNRIDKSGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELSEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKHFFLKETLLIIGSSPEEQQKMFGRHFELEDELDDLSIEEWRLVVKLKTLFKIQ | 1377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 82726800 | 82734044 | - | Bma003381.1 | Bma01g02502 | 77019 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 1 | 259 | - | - | |
Bma01g02502 | 1377 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1139 | 1324 | IPR015760 | - | |
Bma01g02502 | 1377 | Gene3D | - | 790 | 1017 | IPR027417 | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 195 | 212 | - | - | |
Bma01g02502 | 1377 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1139 | 1324 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 446 | 542 | - | - | |
Bma01g02502 | 1377 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 795 | 1078 | IPR027417 | - | |
Bma01g02502 | 1377 | PRINTS | GTP-binding elongation factor signature | 800 | 813 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | PRINTS | GTP-binding elongation factor signature | 864 | 874 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | PRINTS | GTP-binding elongation factor signature | 880 | 891 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | PRINTS | GTP-binding elongation factor signature | 916 | 925 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 125 | 143 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 390 | 407 | - | - | |
Bma01g02502 | 1377 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 767 | 1077 | - | - | |
Bma01g02502 | 1377 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1334 | 1377 | - | - | |
Bma01g02502 | 1377 | Pfam | Translation-initiation factor 2 | 1161 | 1274 | IPR023115 | - | |
Bma01g02502 | 1377 | CDD | IF2_eIF5B | 799 | 1009 | - | - | |
Bma01g02502 | 1377 | TIGRFAM | small_GTP: small GTP-binding protein domain | 801 | 925 | IPR005225 | GO:0005525 | |
Bma01g02502 | 1377 | Gene3D | Translation factors | 1288 | 1336 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 325 | 346 | - | - | |
Bma01g02502 | 1377 | Coils | Coil | 462 | 531 | - | - | |
Bma01g02502 | 1377 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1 | 693 | - | - | |
Bma01g02502 | 1377 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 796 | 1012 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | Gene3D | Translation factors | 1018 | 1088 | - | - | |
Bma01g02502 | 1377 | Gene3D | - | 1175 | 1281 | IPR036925 | - | |
Bma01g02502 | 1377 | Coils | Coil | 392 | 423 | - | - | |
Bma01g02502 | 1377 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 767 | 1077 | IPR015760 | - | |
Bma01g02502 | 1377 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1334 | 1377 | IPR015760 | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 94 | 122 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 144 | 159 | - | - | |
Bma01g02502 | 1377 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1 | 693 | IPR015760 | - | |
Bma01g02502 | 1377 | Pfam | Elongation factor Tu GTP binding domain | 800 | 1006 | IPR000795 | GO:0003924|GO:0005525 | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 625 | 650 | - | - | |
Bma01g02502 | 1377 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1158 | 1287 | IPR036925 | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 390 | 415 | - | - | |
Bma01g02502 | 1377 | MobiDBLite | consensus disorder prediction | 219 | 244 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02502 | Bma-Chr1:82726800 | Bma07g01227 | Bma-Chr7:47163420 | 3.22E-22 | dispersed | |
Bma01g02502 | Bma-Chr1:82726800 | Bma04g00364 | Bma-Chr4:2926167 | 1.95E-19 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02502 | K03243 | - | csv:101204360 | 1402.5 |