Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02503 ATGGATCACGCAGCGGATGCGATGAGGACGGATTTGATGACTATTACTCGCTTCGTTTTGAACGAGCAGTCGAAACACCCGGACTCTCGCGGAGACTTTACCATTTTGCTCAATCATATTGTTCTTGGCTGCAAGTTCGTCTGCTCTGCCGTCAACAAGGCGGGTCTTGCAAAACTAATTGGATTAGCTGGTGAAACCAATGTTCAGGGTGAAGAGCAAAAGAAGCTAGATGTTCTATCCAATGAAGTTTTTATTAAGGCTTTGGTTAGCAGTGGGCGAACATGCATCCTTGTTTCCGAAGAAGATGAAGAGGCAACATTTGTGGATCCCTCTCTTCGAGGAAGGTACTGTGTGGTTTTTGATCCACTGGATGGATCCTCCAACATTGATTGTGGTGTTTCCATCGGAACTATATTTGGGATTTACCATGCGAAAGATAGTGCTCAACCTACCTTAGACGACGTTTTGCGACCTGGAACAGATATGGTAGCAGCCGGGTACTGCATGTATGGAAGCTCCTGCAATCTTGTTTTAAGTACCGGAACTGGTGTACATGGATTCACTCTTGATCCTTCTCTGGGAGAGTTCATTCTGACTCACCCAGATATTCCAAAAAAAGGAAAGATTTATTCAGTAAATGAAGGAAATGCAAAGAACTGGGATGGCCCTACAGCCAAGTTTGTGGAAAAGTGCAAATTTCCTATAGATGGATCATCACCAAAGTCCCTACGGTACATTGGAAGCATGGTAGCTGATGTTCATCGTACACTGCTTTATGGAGGTATCTTCTTGTACCCTGCTGATAAGAAGAGCCCAAACGGGAAACTGCGTGTTCTCTACGAAGTTTTTCCAATGTCATTTTTGATGGAGCAAGCAGGAGGTCAGGCCTTTACTGGGAAGCAAAGGGCATTGGACATGGTTCCTAAAAAGATACACGAGAGATCGCCCATATTTCTTGGCAGCTTTGACGATGTGGAGGAAATCAAAGCATTCTATGCTGCCGAAGGGAACTAA 1014 44.67 MDHAADAMRTDLMTITRFVLNEQSKHPDSRGDFTILLNHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEEATFVDPSLRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYHAKDSAQPTLDDVLRPGTDMVAAGYCMYGSSCNLVLSTGTGVHGFTLDPSLGEFILTHPDIPKKGKIYSVNEGNAKNWDGPTAKFVEKCKFPIDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDMVPKKIHERSPIFLGSFDDVEEIKAFYAAEGN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82735687 82739113 + Bma003382.1 Bma01g02503 77020

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02503 337 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 203 332 IPR044015 -
Bma01g02503 337 Gene3D - 203 337 - -
Bma01g02503 337 Gene3D - 4 202 - -
Bma01g02503 337 ProSitePatterns Fructose-1-6-bisphosphatase active site. 274 286 IPR020548 GO:0005975|GO:0042578
Bma01g02503 337 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 334 IPR000146 GO:0005975|GO:0016791
Bma01g02503 337 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Bma01g02503 337 SUPERFAMILY Carbohydrate phosphatase 7 332 - -
Bma01g02503 337 PIRSF FBPtase_SBPase 9 337 IPR000146 GO:0005975|GO:0016791
Bma01g02503 337 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 335 - -
Bma01g02503 337 PRINTS Fructose-1,6-bisphosphatase signature 210 237 IPR028343 GO:0042132
Bma01g02503 337 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Bma01g02503 337 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Bma01g02503 337 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Bma01g02503 337 PRINTS Fructose-1,6-bisphosphatase signature 308 333 IPR028343 GO:0042132
Bma01g02503 337 PIRSF FBPtase 9 337 IPR028343 GO:0042132
Bma01g02503 337 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 335 IPR000146 GO:0005975|GO:0016791
Bma01g02503 337 CDD FBPase 20 332 IPR000146 GO:0005975|GO:0016791
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02503 K03841 FBP, fbp; fructose-1,6-bisphosphatase I [EC:3.1.3.11] - tcc:18592577 628.632
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02503 Bma-Chr1:82735687 Bma04g01268 Bma-Chr4:38819745 3.97E-111 dispersed
Bma01g02503 Bma-Chr1:82735687 Bma04g00702 Bma-Chr4:7132043 7.62E-97 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1386 Blo01g01724 . . . . . . Bma01g02503 . . . . Car01g00893 . . Cpe06g00880 . . . . . . . . Cla08g00367 Cam08g0791 Cec08g0351 Cco08g0459 Clacu08g0504 . Cre08g0333 . . . Cone20ag0383 . . . . . . Bda11g00878 . . . . . . Cmo01g01050 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008203 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 0 1 1 1 1 3 1 1 34