Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02533 ATGGCCGCTCTGCAACAAACTCCGATTTCCCTCCAAACGAAACTCCCTCCGTCTGGTCTACTTCTCAAGAGAACTTCTACTTCCAGTGGCCTTTCCTTCTCCGCGTCCCTTCCATCTATCAAGCTTTCGGTCATTACTAACCGCTCTACTTGGGGTGCCATGGGAGCGAAAATGGTCGGCACTGTCGCAGGCATCTATGCTGCCGCGCTCGCTGATGTTGCGAAATCCAACAACACGCTGGACTCGACCGGCGGAGATGTCGAAAAGATCGAGAAAATCTTCTCCGACCCTCAGGTTTTGGATTTCTTCGTTAACCCTATCATCGACATCGAGAAGAAGCGGAAGGTGCTCAACGACATCGGAGCCTCCTCATCGCTCCTCCCGCACACCGTAAACTTCCTCCACATTCTCATTGATTCGAAGAGAATCGAACTCATCAAGGAAATCGTTAAGGAATTCGAGGCGGTTTACAACACAGTGACAGACACAGAGCTCGCCGTCGTCACATCGGTGGTGAAATTGGAGTCACAGCACTTGGCGCAGATCGCGAAGCAAATGCAGAAGCTAACTGGAGCGAAGAATGTGAGAATCAAAACAGTGATTGACCCAAGTCTGGTTGCTGGATTCGCCATCAGGTATGGAAATACAGGGTCGAACCTGATTGATATGAGCGTGAAGAAGCAGCTCGACGACATTGCAGCTCAGCTCGATCTCGGAGATATCCAACTCAGTGTCTGA 738 50.68 MAALQQTPISLQTKLPPSGLLLKRTSTSSGLSFSASLPSIKLSVITNRSTWGAMGAKMVGTVAGIYAAALADVAKSNNTLDSTGGDVEKIEKIFSDPQVLDFFVNPIIDIEKKRKVLNDIGASSSLLPHTVNFLHILIDSKRIELIKEIVKEFEAVYNTVTDTELAVVTSVVKLESQHLAQIAKQMQKLTGAKNVRIKTVIDPSLVAGFAIRYGNTGSNLIDMSVKKQLDDIAAQLDLGDIQLSV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83024581 83025318 - Bma003415.1 Bma01g02533 77050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02533 245 Pfam ATP synthase delta (OSCP) subunit 62 236 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PRINTS ATP synthase delta subunit signature 62 81 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PRINTS ATP synthase delta subunit signature 142 156 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PRINTS ATP synthase delta subunit signature 131 142 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PRINTS ATP synthase delta subunit signature 193 208 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 195 214 IPR020781 GO:0015986|GO:0016020|GO:0046933
Bma01g02533 245 Hamap ATP synthase subunit delta [atpD]. 58 238 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 PANTHER BNACNNG66500D PROTEIN 28 244 - -
Bma01g02533 245 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 161 IPR026015 -
Bma01g02533 245 PANTHER ATP SYNTHASE DELTA CHAIN 28 244 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 62 236 IPR000711 GO:0015986|GO:0046933
Bma01g02533 245 Gene3D - 61 155 IPR026015 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02533 Bma-Chr1:83024581 Bma05g01197 Bma-Chr5:51210567 1.61E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02533 K02113 - tcc:18594548 322.783