Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02539 | ATGGCAGGCTCCGCGAAGAGCAACCCACTTTCTGTCTCTTCTACTTCGCGTAACCCTTTTCATTTCTCGCCCGAATCTCCTCCCCCGATCGCTGTCTCGCCCGATCAGATCAAATTCTGCTCTGAGGCTCTGAGGTTATTCAGGGAGAAGCTCCGGACGCCTCACACTATTTCGGAAGAGTTTATGAACTTGCAGCAGGCCAATAGAATCACGTTACCTACCATGCAAAGAAGTTGCACCGTGGCTCTTGACAGTGTCAACTTGAGCAAAAACCGCTACACAGATGTCATACCATTTGACAGTGCTAGAGTGGTACTCAACTCATGTAGAGATTACAGACCTTCTGCAAGGGGCTACATTAATGCGAGCTTTGTCTCGACTTCTTCTTCAGACAACGTTACTAAGTTCATAGCCACACAAGGTCCTCTACCACATACATACGAAGATTTCTGGGAGATGGTGATTCAGTACCGTTGTCCCGTGGTTGTGATGCTTACCAAATTAGTTGACAATTACACGTTTGTGAAATGTGGAGACTATTTCCAGGCAGAAGATGGTCCGAGAGATTTTGGCAATATATCTATTATCACCAAATGGATAGACACTTCTGACATTTCTTTAGTGTTGCGTCAATTAGAGGTCAAACACAAAGAGTCGGAAGAGGAACCTTTGTCGGTTTTGCATATTCAGTACCCTGAATGGCCTGACCATGGAGTTCCGGAGGACACAAAGGCCGTTCGAGAAATATTTAAACGAATATATCAAGTGCCTCCAAATCTAGGCCCAATAGTGGTTCATTGCAGTGCAGGTATTGGGAGAACTGGAGCATACTGCACTATACATAATACAATCCAAAGAATTCTTTCAGGAGACATGTCTGCTTTAGATCTTGCTAAAACCATTACTTGTTTTAGATCGCAGCGAATTGGAATGGTTCAAACTCTGGTAATTTTCATTTTCTCGTATCAAATAAGAGTTTTAGCGTATAATACTATGCGAGCATGGCATGTTATATGTAGTATGTTGATAATTGTGGGTTCTCCTCCATAA | 1050 | 43.24 | MAGSAKSNPLSVSSTSRNPFHFSPESPPPIAVSPDQIKFCSEALRLFREKLRTPHTISEEFMNLQQANRITLPTMQRSCTVALDSVNLSKNRYTDVIPFDSARVVLNSCRDYRPSARGYINASFVSTSSSDNVTKFIATQGPLPHTYEDFWEMVIQYRCPVVVMLTKLVDNYTFVKCGDYFQAEDGPRDFGNISIITKWIDTSDISLVLRQLEVKHKESEEEPLSVLHIQYPEWPDHGVPEDTKAVREIFKRIYQVPPNLGPIVVHCSAGIGRTGAYCTIHNTIQRILSGDMSALDLAKTITCFRSQRIGMVQTLVIFIFSYQIRVLAYNTMRAWHVICSMLIIVGSPP | 349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 83087727 | 83090094 | + | Bma003419.1 | Bma01g02539 | 77056 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02539 | 349 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 265 | 275 | IPR016130 | GO:0016311|GO:0016791 | |
Bma01g02539 | 349 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 7 | 325 | - | - | |
Bma01g02539 | 349 | Gene3D | Protein tyrosine phosphatase superfamily | 35 | 330 | IPR029021 | - | |
Bma01g02539 | 349 | CDD | PTPc_plant_PTP1 | 119 | 322 | - | - | |
Bma01g02539 | 349 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 57 | 328 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 42 | 330 | IPR029021 | - | |
Bma01g02539 | 349 | SMART | PTPc_3 | 56 | 330 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 262 | 280 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 136 | 156 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 118 | 125 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 224 | 241 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 311 | 321 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | PRINTS | Protein tyrosine phosphatase signature | 295 | 310 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | Pfam | Protein-tyrosine phosphatase | 87 | 324 | IPR000242 | GO:0004725|GO:0006470 | |
Bma01g02539 | 349 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 247 | 319 | IPR000387 | GO:0016311|GO:0016791 | |
Bma01g02539 | 349 | SMART | ptp_7 | 225 | 327 | IPR003595 | - | |
Bma01g02539 | 349 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE PTP1 | 7 | 325 | - | - | |
Bma01g02539 | 349 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02539 | - | - | mnt:21399479 | 489.96 |