Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02572 ATGGCGAATCCTCAGGCGCCGGGGCATCGGAGAGGCAGGGCAGCTCAGGCGCATCTACCTGTGGTCTGTGGTAGGGTTCCGTTGAGAAAGTTACTCCGAGTGGCATCGGTGGCTTGTGGAATTCAATTCGGATGGGCTCTCCAGCTCTCTCTTTTGACCCCCTACGTGCAGCAGCTTGGAATTCCTCACGCATGGGCTAGCATCATATGGCTTTGCGGACCTCTCTCGGGACTTTTGGTTCAGCCGCTGGTCGGCCACTTGAGCGACCGGTGCACGAGTCGGTTTGGCAGGCGGAGGCCTTTCATTGCCGCCGGAGCGTTGGCGATTATTGTCTCTGTATTGGTAATCGGACATTCGGCGGACATCGGATGGTTGATCGGCGATAGAGGTAAGGTTAGGCCAGCTGCAGTTGCGACCTTTGTCCTCGGGTTTTGGATCCTTGATGTTGCCAATAACATGACGCAAGGACCCTGCAGGGCCCTACTTGCCGATCTTACCGGAAATGATCATCGGAGGACGCGGGTGGCTAATGCTTATTTTTCTCTTTTTATGGCTGTTGGCAATATTCTTGGTTTTGCTACTGGATCCTACAGTAAATGGTTCAAGATTTTCCCCTTTACTCTTACATCTGCGTGCAATGCAAGTTGTGCAAATCTCAAGGCAGCTTTCTATCTTGATGTTGTGTTCGTGGCAGTCACGACGTATCTGAGCATATCTGCAGCTCAAGAATCAACTTTCACTCCGAGTGAGGGAGCTGCTCCAGTTGCTGGAGAAAGGTCGGAACAGACGAGCAATTCTCAAGAAGCTTTCCTGTGGGAGCTTTTTGGCACATTTAGATACTTCTCAGGGTCCATATGGATCATTTTGTTGGTCACTGCACTGACCTGGATTGGTTGGTTTCCTTTTCTTCTCTTTGATACTGATTGGATGGGTAGAGAGATATTTGGAGGTGAGCCAAATGAAGGGCTGAGTTATGATACTGGCGTTAGAGTTGGCGCACTTGGTCTGATGTTAAACTCAGTTGTTCTCGGAATAACTTCATTGCTCATGGAGAAGCTCTGCAGAAAGTGGGGGGCGGGTATTGTGTGGGGGGCATCAAACATCATCATGGCTCTTTGCTTTCTTGCAATGCTTGTTGTTACATTTATGGCAAAGAGGATCAAGAATGTTGATGATCAGCCACCTCCAGCTGGTATTGTGGCAGCTGGATTGATAATTTTTTCTATTCTGGGTGTTCCATTGGCAATCACTTACAGTGTTCCTTATGCCCTGATTTCAACACACATTGGTTCCCTCGGACTTGGACAAGGATTATGCATGGGAGTACTGAATCTAGCTATAGTAATTCCACAGCTCTCTAACTCCTGTCTAATCCATCTTATATGTAATTTTTTAGAGACTACATTTATGGCGCAATTGGTTGAAGATGAAACTCAAATGGAAGCTACTCCATCAGGTTGTTCAAGGGTAATGAATTGGCATCTTCATTTGGAATCGCCAAATCTAATTTATCCCAAGGGATGGCTGTTGCAGAAAAACCTCGACTTTATTATGCCTATCATGTGA 1566 47.38 MANPQAPGHRRGRAAQAHLPVVCGRVPLRKLLRVASVACGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFIAAGALAIIVSVLVIGHSADIGWLIGDRGKVRPAAVATFVLGFWILDVANNMTQGPCRALLADLTGNDHRRTRVANAYFSLFMAVGNILGFATGSYSKWFKIFPFTLTSACNASCANLKAAFYLDVVFVAVTTYLSISAAQESTFTPSEGAAPVAGERSEQTSNSQEAFLWELFGTFRYFSGSIWIILLVTALTWIGWFPFLLFDTDWMGREIFGGEPNEGLSYDTGVRVGALGLMLNSVVLGITSLLMEKLCRKWGAGIVWGASNIIMALCFLAMLVVTFMAKRIKNVDDQPPPAGIVAAGLIIFSILGVPLAITYSVPYALISTHIGSLGLGQGLCMGVLNLAIVIPQLSNSCLIHLICNFLETTFMAQLVEDETQMEATPSGCSRVMNWHLHLESPNLIYPKGWLLQKNLDFIMPIM 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83321177 83327665 + Bma003454.1 Bma01g02572 77089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02572 521 Pfam MFS/sugar transport protein 44 193 - -
Bma01g02572 521 PANTHER SUGAR TRANSPORTER 11 453 - -
Bma01g02572 521 Gene3D MFS general substrate transporter like domains 29 245 IPR036259 -
Bma01g02572 521 SUPERFAMILY Nucleotide-diphospho-sugar transferases 461 513 IPR029044 -
Bma01g02572 521 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 11 453 - -
Bma01g02572 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 454 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bma01g02572 521 SUPERFAMILY MFS general substrate transporter 31 452 IPR036259 -
Bma01g02572 521 CDD MFS_SLC45_SUC 31 452 - -
Bma01g02572 521 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 448 512 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02572 Bma02g00169 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02572 Bma-Chr1:83321177 Bma02g00183 Bma-Chr2:1679902 5.79E-153 dispersed
Bma01g00089 Bma-Chr1:1005691 Bma01g02572 Bma-Chr1:83321177 2.83E-76 transposed
Bma02g00169 Bma-Chr2:1489160 Bma01g02572 Bma-Chr1:83321177 1.25E-74 transposed
Bma05g00725 Bma-Chr5:43159589 Bma01g02572 Bma-Chr1:83321177 5.77E-82 transposed
Bma05g00740 Bma-Chr5:43572069 Bma01g02572 Bma-Chr1:83321177 5.35E-138 transposed
Bma14g00823 Bma-Chr14:9157942 Bma01g02572 Bma-Chr1:83321177 2.27E-152 transposed
Bma01g02572 Bma-Chr1:83321177 Bma02g00092 Bma-Chr2:796201 5.84E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02572 K15378 - jre:108981737 717.227