Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02581 ATGCCGCATAGAACTACTTACTTCTTTCCCAGACAGTTTCCTGATCACGGATTGGAACAGGCGTCAACTTCTAAACAGAAGTTAGACCAAGAGACGAAGATAAAAAAAGATGCGTATGACGCAGAAAGCGACTCGAAGTCGATCCCACGGCTTTCCTTCGAAACAACGGTTACGAAGACTTCTGCTTTATCAGGCCTTTTCCCGGGGAACGAGTTTCAAGACAAGGAACAGGTCACTCCCTTCTCTGATTGGTTAGTAGACAAGAAAGCGGCCCGATCGACATCGACTCACGTGAAGACCTGGCTTTCTAACTGCGACGATGGCCGGGAGATACTTCTTTCGTCGCCGACTGTGGAAGCAGAGTCAGAGCCGATGTTTGCTCAAGATAGAAGTGCTGACAGAAGCTTTGACCGGCATGCTTCATTGCCCAGGTTATCATGCGGGAGTAGTTATGCTGGGAGCTTATTTTCCGGCGCGGGAATGGAGACAGTAAATGAAATTTCGTCCATAAGTGTTGATTCAACGGCACAACAAATTTCGTCGTCCTTGCCTATTACGAGACCGGAGGAGGTGGAGGAGAGAAGGGAAAACTTGTCGCAAAAGATTAGAGAGAGTTACTATCTACAACTTGCCATGACTAAAAGGCTCACTTCCCAGGCTAGCGTTGGTAGCGAGCCGCTGTTTATACAAGACAGTAGAATGGAGGTCGCGGATGCTGAAACTGTTTCTTATCGACTTTGGGTTAATGGCTGCTTATCTTACTCTGACAAGATATCAGATGGCTTTTACAATATTTTGGGCATGAATCCATATCTTTGGATGATGTGCAGTGAATTTGAGGAAGGCAGACGAATGCCTCCTCTCATGTCGCTTAAAACAGTTGAATCTAGTGAGACTTCAATGGAGGTGGTCCTTGTTGATCGGCAGTGGGACTTGCGCCTGAAAGAACTCGAAGATAAAGCACAAGAATTGTGTTCTTCTTCAGATAATAATCTAGTGTTGGTACAGAAATTGGGAAAACTCGTTGCCGTCTATATGGGCGGGGCTTTTTCAGAGGAGCAAGGAGATCTTCATTTGCACTGGAAATTGGCGAGTAAGAGTTTGAGGGATATTCAGAAATGCATAGTGCTTCCCCTTGGTAGTTTATCAATGGGACTATGCAGGCATCGCGCAATACTTTTTAAGATATTAGCAGATAGCATTGGTTTGCCATGTCGTATAGCTCGAGGGTGCAAGTACTGTGTTGCACATCATAAGTCTTCTTGCCTAGTTAAAATTGAAGACGACAGAAGGGAATATGTTGTTGACCTTGTTGGTGAACCGGGAAATATACAGGGTCCAGATTCTTTAATTAATGGATATCTGCCTTCTTCAGTGCCTTCTCCATATCAAATTTCTCATCTTAAAGAATTTCAACAATCTTACATAGACCCTCCCTCATATTTTCCATCAAAATGGTTACCAAATGAAGGAAGCTTTTTATTTAAAAGTTTAAGTGACGAACCTGTTGATCGACCTTGTATAGGAATGCAATTCTCACCGATGGGCGTTGATATGAAGGCCAATGCTGAAGATTGCTTGCATCAGGGTCAAATGAAAGCTGCTGAATTAATTGGTGCTGCTAGTGGGACGTCTTTGCAAAAGAAATGTTTGAACCTAGTGGAAAATAAATTTGGTGTACATGCGGAAGAAAAAGAAAGAGTGGCATTAGGAAGTATAACGATGGATAACAGTATGAAACAACCTATAGTAACTGCAGCCAGTCTATCGAATCGGAAAAATATTGAAAGTAATACTGGAAATAAAGGTAGATTTTCAGCTCCAACAGTCCCAAGATACGTAAATCTTGAACCCTCTCTTGCAATGGATTGGCTTGAGATCTCGTGGGATGAATTGCATATCAAAGAACGTGTTGGTGCTGGCTCATTTGGTACAGTGCATCGGGCTGAGTGGCATGGATCAGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCTATGAGGATCAATTGAAGGAGTTTTTAAGAGAGGTTGCAATAATGAAGCGCGTTCGCCATCCAAATTTGGTTCTATTTATGGGTGCTGTTACAAAACGTCCTCATTTGTCGATAGTGACTGAGTACTTGCCAAGGGGTAGTCTATACCGACTGATTCATAGACCAGCTTCTAGTGAGATGCTGGACCAGAGGAGGCGGTTGCGCATGGCATTGGATGTGGCCAAGGGGATCAATTATCTCCACTGCCTTTGTCCTCCCATAGTGCATTGGGATCTTAAAACCCCGAACTTGTTGGTCGACAAAAATTGGACTGTGAAGGTATGCGATTTTGGCTTGTCCAGATTCATAGCAAACACTTTTATATCATCAAAATCTGTAGCTGGAACACCTGAGTGGATGGCTCCTGAATTCCTTCGAGGCGAGCCCTCAAACGAAAAGTCTGATGTATATAGTTTCGGCGTGATCCTTTGGGAACTTGTTACGATGCAACAACCTTGGAGCGGACTTGGTCCTGCCCAGGTGGTCGGAGCTGTTGCCTTTCAAAATCGAAGACTTGTTATCCCTCATAATACTTCCCCATTGTTAGCTTCTCTTATTGAAACTTGCTGGGCTGATGATCCTGTTCAACGCCCGTCTTTCAGAAGCATAGTGGACTCACTAAAGAAGCTACTCAAGTCCCCGCATCAGTTGATAGAGACGGGAGGAACGTAG 2709 44.08 MPHRTTYFFPRQFPDHGLEQASTSKQKLDQETKIKKDAYDAESDSKSIPRLSFETTVTKTSALSGLFPGNEFQDKEQVTPFSDWLVDKKAARSTSTHVKTWLSNCDDGREILLSSPTVEAESEPMFAQDRSADRSFDRHASLPRLSCGSSYAGSLFSGAGMETVNEISSISVDSTAQQISSSLPITRPEEVEERRENLSQKIRESYYLQLAMTKRLTSQASVGSEPLFIQDSRMEVADAETVSYRLWVNGCLSYSDKISDGFYNILGMNPYLWMMCSEFEEGRRMPPLMSLKTVESSETSMEVVLVDRQWDLRLKELEDKAQELCSSSDNNLVLVQKLGKLVAVYMGGAFSEEQGDLHLHWKLASKSLRDIQKCIVLPLGSLSMGLCRHRAILFKILADSIGLPCRIARGCKYCVAHHKSSCLVKIEDDRREYVVDLVGEPGNIQGPDSLINGYLPSSVPSPYQISHLKEFQQSYIDPPSYFPSKWLPNEGSFLFKSLSDEPVDRPCIGMQFSPMGVDMKANAEDCLHQGQMKAAELIGAASGTSLQKKCLNLVENKFGVHAEEKERVALGSITMDNSMKQPIVTAASLSNRKNIESNTGNKGRFSAPTVPRYVNLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFYEDQLKEFLREVAIMKRVRHPNLVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASSEMLDQRRRLRMALDVAKGINYLHCLCPPIVHWDLKTPNLLVDKNWTVKVCDFGLSRFIANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLVIPHNTSPLLASLIETCWADDPVQRPSFRSIVDSLKKLLKSPHQLIETGGT 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83432251 83437972 + Bma003465.1 Bma01g02581 77098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02581 902 Gene3D Phosphorylase Kinase; domain 1 625 709 - -
Bma01g02581 902 SUPERFAMILY Protein kinase-like (PK-like) 608 885 IPR011009 -
Bma01g02581 902 Pfam Protein tyrosine and serine/threonine kinase 632 886 IPR001245 GO:0004672|GO:0006468
Bma01g02581 902 Gene3D Transferase(Phosphotransferase) domain 1 711 897 - -
Bma01g02581 902 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 114 900 - -
Bma01g02581 902 ProSitePatterns Protein kinases ATP-binding region signature. 638 659 IPR017441 GO:0005524
Bma01g02581 902 CDD STKc_MAP3K-like 638 886 - -
Bma01g02581 902 SMART serkin_6 632 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02581 902 PRINTS Tyrosine kinase catalytic domain signature 813 835 IPR001245 GO:0004672|GO:0006468
Bma01g02581 902 PRINTS Tyrosine kinase catalytic domain signature 857 879 IPR001245 GO:0004672|GO:0006468
Bma01g02581 902 PRINTS Tyrosine kinase catalytic domain signature 706 719 IPR001245 GO:0004672|GO:0006468
Bma01g02581 902 PRINTS Tyrosine kinase catalytic domain signature 747 765 IPR001245 GO:0004672|GO:0006468
Bma01g02581 902 ProSiteProfiles Protein kinase domain profile. 632 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02581 902 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 114 900 - -
Bma01g02581 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Bma01g02581 902 Pfam Ethylene-responsive protein kinase Le-CTR1 239 444 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02581 Bma01g00729 CCT
Bma01g02581 Bma01g00729 ECH
Bma01g00729 Bma01g02581 ECH
Bma01g02581 Bma04g00428 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02581 Bma-Chr1:83432251 Bma10g00075 Bma-Chr10:773719 0 dispersed
Bma01g02581 Bma-Chr1:83432251 Bma04g00428 Bma-Chr4:3515283 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66312 PF07714 PK_Tyr_Ser-Thr 1.00E-63 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02581 - - csv:101204522 1205.66