Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02586 ATGGAGGTCTTAGATTCCAAGCCTGTAGATTCATCGCAATCTGTCCGGGTAGCTGTTAATATTAGACCATTGATAACACCTGAGCTTCTTGTTGGATGTACGGACTGCATCACTATTGTTCAGGGAGAACCTCAGGTGGTTATTGGCTCTCATGCATTCACTTATGATTACGTTTATGGTAACACCGGATCAGCTCCTTCCACCATTTATGAAGATTGTGTTGCTCCACTTGTTGATGCTCTTTTCCACGGCTATAATGCAACCGTTCTTGCTTATGGCCAGACTGGTTCTGGAAAGACATACACTATGGGTACAAATTACAAAGGAGATGATATCTATGGTGGAATAATACCTAAAGTAATGGATAATATTTATAAAAGAGTTGAGGTAACGAGAAATTCAGTGGAGTTTTTGATCAGAGTATCATTTATCGAGATATTTAAGGAAGAAGTATTTGATTTGCTCGATTCAAATATATCAGCTATATCCAAAGGTGAAGGGGCTCTTGGTAAACCCTTTGTGCCCATGAGAGCTCCTATTCAAATCAGAGAAGCAATTAATGGAGGGATAACACTAGCAGGTGTTACTGAGGCTGAAGTGAGAACCAAAGAAGAGATGGCCTCATACTTGTCGCGAGGTTCTTTATCTCGCGCAACAGGGAGTACCAACATGAATAGTCAGTCAAGTCGATCACATGCTATATTTACAATTACCATTGAGCAAAAGAAAAGCGTTGGCAACCTGTCTGGTGTATCTCATGATGATACAAGTGATGATGTACTATGTGCAAAACTCCATTTGGTGGATCTAGCTGGTTCAGAACGAGCAAAACGAACAGGCGCTGATGGCTTGCGTTTTAAAGAAGGAATTCATATCAATAAGGGTTTGTTGGCTCTTGGCAATGTTATAAGTGCATTGGGAGATGAGAAGAAAAGAAAAGAAGGAGGCCATGTACCTTATCGAGATAGCAAGCTAACTCGTTTGTTACAGGATTCTTTGGGGGGAAACAGTAAAACCGTCATGATTGCATGTGTTAGTCCTGCTGACACAAATGCTGAGGAGACGTTGAATACATTGAAATATGCAAATCGTGCTCGTAATATTCAAAACAAGGCAATTGTTAACCGTGATCCTGCGACTGCTCAAATTCAAAGAATGAAGAGCCAAATTGAACAATTGCAATCTGAGCTTCTATTCTATCGTGGTGACATGGGTGCACCATGTGAGGAACTTCAGATTCTTAAACACAAAGTATCAGTACTCGAAGCAAGTAATGTAGAGTTAAAGCAAGAGGTTTTAGAGCGTCAAATTACATGCAAGCATTTAACTCAACGTGCTATAGATGCTCAGGTGGAAAAAGACAAACTGGTTATGAAAATCGAATCTGCCCGAAACGGTAAATCATGGGATGAGATTGACTCCACTTCTGAAAAGGATTATGATTTAGTTCAAAATTACGTTTCAAAAATTCAAGAGCTTGAAGCGGAACTATTGCATTCAAGAAACACGAATGGCTCAAAGATAAATCGATTTCATGATTGTATGGATACAGACGACGATAAGGAAGATTGCAAAAATGTTTTGTTTCCACCAAGTGATTATGGATCTGATTTTGAGCCCAAATCTGGAGATTTTTCAGATGAGATTGAAGATCAGGAGAAGGAGCTTGAACATTCTTCTCTTCAAGAAAAATTTGATAAGGAGCTTAAAGAACTAGATAAGAAGCTTGAACTCAAGGAGGCTGAAATGAAGCGGTTTGCTGGTGGCGATGCATCAGTGGTTAAACAACATTATGAAAAAAAAGTTCAAGAGTTGGAAATAGAAAAACGGACTTTACAGAGAGAAATCGAGGTACTTACATGTAATCTTGCAAATATATCTTCTACATCTGGTGATGGTGCTCAAAAGTTGAAGGAAGAATATCTTCAGAAATTGAATGTACTTGAAGCACAGGTTTCTGAATTGAAAAAAAAGCAAGATGCTCAATCTCAATTAGTGAGACAAAAGCAAAAGAGTGATGAAGCTGCAAAGAGATTGCAGGATGAGATCCAAAGAATAAAATCTCAAAAGGTTCAACTGCAGCATAAGATTAAACAAGAGTCTGAGCAGTTTCGGTTATGGAAGGCTTCACGAGAAAAAGAAGTGCTTCAGCTCAAGAAAGAGGGGAGAAGGAATGAGTATGAGATGCACAAGTTGTTGGCCCTGAATCAGAGACAGAAAATGGTTTTGCAAAGGAAAACCGAAGAAGCTGCACTAGCAACGAAAAGATTAAAAGATCTTTTGGAATCTCGAAAGGCTGCTTCACGAGAAACGTCTAATTTTAGAAACGGAAATGGTTCAGGGCTCCAGGCTCTAATGCAAGAAATTGAGCACGAACTTGAAGTCACTGTACATGTGCACGAAGTGCGTTCTGAATATGAGCGGCAAATGGAAGAGAGGGGAAGAATGGCTAAGGAAGCTGCAATGCTTAAGGAAAATAATCAAAGTGACAGTGCCCAGTCAATGTCTCCCGGTGCAAGAAATTCAAGAGTTTTTGCACTTGAAAACATGCTTGCTACTTCATCTAGCATGTTAGTTTCCATGGCATCACAATTGTCAGAGGCAGAGGACCGTGAGCGACTTTTCAGTGGTAGAGGACGTTGGAATCAAGTTCGATCTCTTATTGATGCAAAAAACATAATGAATTTCTTGTTTAATTTAGCATCTTCTTCCAGGTGTTTGTTAAGAGATAAGGAAGTTGCCTGCAGAGAAAAAGAGTCAGAAATAAGAGAATTGAAGCAAAAATTATTTAATCTCAATAGTTCGCTCAGAAAATTAGAAATGCAAAAGGCCGAACTTATTCATCAGAATTCAACCTTAAAGAATTACTCCATGAATAGCTTACTGCAATCTCCCAAAAACAAGGGATTTAAGTATGACTCACACAAGCAGGAAATTTGCTCTTCCGTCGTCTTGTTGGAGGACATGGATACGTCAGAATCTGAATGTTCAGACATTGATGATACAACTGATGATGATTGGGTTGCTTCAGCAAAAAAACAAGCTGCGAGAAAAAATAATAAAAGTAATAGAGGTCGTTCAAGTATGGCACCATCATCGGGTGGTAATCACTCTTTGACTCCAGCATTAGACAGTTTTGGAGAAGACATTAGTCGTGTGAATAGCATTACTGCCTCTGGATTGTGTTGCTCCTGCAGTAGAGTTTCGTTGTGCAAGACAAACAAATGCCAATGCAGAGCTAATGGAGGTTTTTGCGGCTCGTCATGTGGTTGTAGATTGTCTAAATGTACAAATCGAGATGGAAAAAGTGAGCAGGATGTGCAATCTCAGATGCAAGTTGAAGAAAACGGAAATGGTTCTGAAATTGATGAATCAGATAGAAACCAGGGTCTTGCTTCGCATGGAGCAATGTTACTTCAAAATGCATTAGCTGACAAGCCTGTTGAGGGTGGAAGAAAAGCTTTATCCGACATTGGCAACACTCAGACTAAGTCAAATATACCAAAGCCAAATCAGAGAAAGAAATGGAGGAAATCAACAACAATTCAGCTCGTTACTGATGATTCAACTCCAATGCAATCAATACCAGAAGCCATTCAATCCCAGAAGCCAGAAAACAGCACCGGTGAGGTAAACATCCCATTAAAGTTACCCAGAGCAATGAGATCTGCTTCATCAAACGGTGGAGGATTATTGAGAGAGAGGAATGTGAGCCAGATTGATGAATCAGTGGGCAGTAAAGATGGGGGAGCGCTTGTTCCAGCAAGTCCTGTAAGACAGAAGAAGGCCTCGGACGAGAAAGAGAACTGCGGCCTCTGA 3819 40.01 MEVLDSKPVDSSQSVRVAVNIRPLITPELLVGCTDCITIVQGEPQVVIGSHAFTYDYVYGNTGSAPSTIYEDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYKGDDIYGGIIPKVMDNIYKRVEVTRNSVEFLIRVSFIEIFKEEVFDLLDSNISAISKGEGALGKPFVPMRAPIQIREAINGGITLAGVTEAEVRTKEEMASYLSRGSLSRATGSTNMNSQSSRSHAIFTITIEQKKSVGNLSGVSHDDTSDDVLCAKLHLVDLAGSERAKRTGADGLRFKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAIVNRDPATAQIQRMKSQIEQLQSELLFYRGDMGAPCEELQILKHKVSVLEASNVELKQEVLERQITCKHLTQRAIDAQVEKDKLVMKIESARNGKSWDEIDSTSEKDYDLVQNYVSKIQELEAELLHSRNTNGSKINRFHDCMDTDDDKEDCKNVLFPPSDYGSDFEPKSGDFSDEIEDQEKELEHSSLQEKFDKELKELDKKLELKEAEMKRFAGGDASVVKQHYEKKVQELEIEKRTLQREIEVLTCNLANISSTSGDGAQKLKEEYLQKLNVLEAQVSELKKKQDAQSQLVRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEAALATKRLKDLLESRKAASRETSNFRNGNGSGLQALMQEIEHELEVTVHVHEVRSEYERQMEERGRMAKEAAMLKENNQSDSAQSMSPGARNSRVFALENMLATSSSMLVSMASQLSEAEDRERLFSGRGRWNQVRSLIDAKNIMNFLFNLASSSRCLLRDKEVACREKESEIRELKQKLFNLNSSLRKLEMQKAELIHQNSTLKNYSMNSLLQSPKNKGFKYDSHKQEICSSVVLLEDMDTSESECSDIDDTTDDDWVASAKKQAARKNNKSNRGRSSMAPSSGGNHSLTPALDSFGEDISRVNSITASGLCCSCSRVSLCKTNKCQCRANGGFCGSSCGCRLSKCTNRDGKSEQDVQSQMQVEENGNGSEIDESDRNQGLASHGAMLLQNALADKPVEGGRKALSDIGNTQTKSNIPKPNQRKKWRKSTTIQLVTDDSTPMQSIPEAIQSQKPENSTGEVNIPLKLPRAMRSASSNGGGLLRERNVSQIDESVGSKDGGALVPASPVRQKKASDEKENCGL 1272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83488341 83496771 - Bma003472.1 Bma01g02586 77103

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02586 1272 SMART CXC_2 1058 1102 IPR033467 -
Bma01g02586 1272 CDD KISc_KIF4 14 369 - -
Bma01g02586 1272 ProSiteProfiles Kinesin motor domain profile. 14 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 10 1249 - -
Bma01g02586 1272 Coils Coil 638 703 - -
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1151 1178 - -
Bma01g02586 1272 SMART kinesin_4 12 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1098 1129 - -
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1103 1126 - -
Bma01g02586 1272 Pfam Kinesin motor domain 47 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1221 1272 - -
Bma01g02586 1272 Coils Coil 562 582 - -
Bma01g02586 1272 Coils Coil 376 403 - -
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1011 1041 - -
Bma01g02586 1272 Coils Coil 411 431 - -
Bma01g02586 1272 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 PRINTS Kinesin heavy chain signature 264 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 PRINTS Kinesin heavy chain signature 318 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 PRINTS Kinesin heavy chain signature 84 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma01g02586 1272 Coils Coil 908 949 - -
Bma01g02586 1272 PANTHER KINESIN-LIKE PROTEIN KIN-4C 10 1249 - -
Bma01g02586 1272 Coils Coil 595 629 - -
Bma01g02586 1272 Coils Coil 743 770 - -
Bma01g02586 1272 MobiDBLite consensus disorder prediction 1021 1040 - -
Bma01g02586 1272 Coils Coil 483 503 - -
Bma01g02586 1272 ProSitePatterns Kinesin motor domain signature. 263 274 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bma01g02586 1272 Gene3D Kinesin motor domain 9 401 IPR036961 -
Bma01g02586 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 403 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02586 - - - zju:107421275 1672.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02265 Bma-Chr1:79809239 Bma01g02586 Bma-Chr1:83488341 0 dispersed
Bma01g02586 Bma-Chr1:83488341 Bma14g00478 Bma-Chr14:5404537 2.68E-67 dispersed
Bma07g00703 Bma-Chr7:15618621 Bma01g02586 Bma-Chr1:83488341 8.04E-28 dispersed
Bma01g02586 Bma-Chr1:83488341 Bma07g01518 Bma-Chr7:50790428 2.29E-68 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g516 . . . . . . . Bma01g02586 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00208 . . . . . . . . . . . . . . . . . . Bhi09g02497 . . . . Mch11g0708 . . . . . . . . . . . Cme04g00238
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009556 2 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32